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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Free State University Choir wins competition in Prague
2009-12-15

This past weekend, the Free State University Choir, under the directorship of Mr Corné van Pletzen, won the Christmas Music Festival Competition in Prague in the Czech Republic. 25 choirs from amongst others Spain, Hungary, Slovakia and Russia also participated in the competition.

It is the first time in the 10 years that the Christmas Music Festival Competition is presented that an overall winner of the festival and the competition was announced.

The choir originally only participated in the festival part of the Christmas Music Festival. Later, at the end of the competition, they were asked by the judges to prepare a song for the prize-giving ceremony, not knowing that the judges were judging them for the competition.

Mr Van Pletzen said, “Finally, after all prizes had been handed out, a trumpet fanfare announced the Free State University Choir as the overall winner of the competition. Our choir was also requested to close the competition with a song; that we did, whereupon our students sang the National Anthem with pride and with tears in their eyes.

The choir’s presentation was unique as they included a great variety of songs in their programme, amongst others some of Mr Van Pletzen’s own compositions and a song from Africa, Wana Baraka.

According to Mr Van Pletzen, six of the choirs obtained more than 90% during the competition. The Free State University Choir was however overwhelmed with positive feedback on the standard of their presentation from the audience, other participating choirs as well as the judges.

Most of the 38 choir members have already been members of this choir for three years now and this is the third time that most of them are singing overseas.

They will bring home a beautiful glass trophy.

Mr Corné van Pletzen.

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