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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Mid-year prize-giving ceremony for UPP and Extended Programme students
2012-09-20

Prof. Neil Heideman, Dean of the Faculty of Natural and Agricultural Sciences, with top achiever Buyisani Masabalala.
20 September 2012

With a subject percentage of 94% in Chemistry and 89% in Mathematics, Buyisani Masabalala is at the top of his class. The student, who is part of the University Preparation Programme (UPP) offered on the South Campus of the University of the Free State, was named top student in the Natural Sciences for students in the programme.

Buyisani and 28 other students on the UPP and Extended Degree programme, received certificates at a prize-giving ceremony held on the South Campus. They were top performers during their first six months in all subjects on the UPP and Extended Degree programme. The UPP is a one-year bridging programme for students who do not meet the initial admission requirements for mainstream studies at a university. The extended degree programme caters for students who do meet mainstream university admission requirements but have a lower admission score.

With their excellent results, Buyisani and the other top achievers are now one step away from entrance into mainstream studies. They are now awaiting their final results that will be out at the end of the year. As an incentive to study even harder, the UPP top achievers in the Faculties of Humanities, Economic and Management Sciences, Natural and Agricultural Sciences and Agricultural Sciences and Education will each receive a bursary at the end of the year. The same applies for top achievers in the B Com and BSc Extended Programme and the Vocational Directed Preparation Programme top achievers.

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