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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Second group joins Prestige Scholars Programme
2013-02-22

 

Some of the new scholars in the programme are seen here with Prof Jackie du Toit. From the left are: Drs Gladys Kigozi (Centre For Health Systems Research & Development), Brian van Soelen (Physics), Charles Haddad (Zoology and Entomology), Prof Du Toit and Tanya Beelders (Computer Science and Informatics).
Photo: Johan Roux
22 February 2013


A second group of 15 young academics is selected to be part of the Vice-Chancellor’s Prestige Scholars Programme (PSP). The first group of 25 scholars joined the programme in 2011 and some of them were placed at partner universities abroad during 2012.

The programme identifies and promotes promising young academics in the university towards becoming full professors with superior research accomplishments.

Prof Jackie du Toit, Academic Co-director of PSP, says: “This highly prestigious cross-disciplinary programme for the next generation of UFS professors in the last two years produced Fulbright scholars; NRF Y1-rated young scholars; NRF Blue Skies and Thuthuka recipients and several National Research Foundation Y2 ratings.

“Scholars on the programme have created partnerships at leading universities in Japan, Europe, the UK and the USA. Within the South African academy, the PSP is a novel approach to the advancement of scholarship and the development of professional scholars. It contributes towards positioning the UFS as an innovator among research universities in this country.”

“This fast-tracking of the next generation of professors involves an intense mentorship programme at the UFS and an international placement with a leading scholar in a top university.”

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