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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Kovsie students bring warmth to the Bloemfontein community
2013-06-01

 

Michael van Niekerk and Melissa Lucas, prime of Akasia, making up the packages.
Photo: Linda Fekisi
14 June 2013

It goes without saying that winter in Bloemfontein is scarcely pleasant, especially if you do not have the proper clothing. Members of the Kovsie community have taken a step towards giving a helping hand to those in need. Share the Warmth Winter wonder box is a project that was launched by the SRC City Residences and Commuter students to help keep the cold away. Students and staff of the University of the Free State (UFS) donate a package which includes a blanket, beanie, gloves, socks and sweets, to be handed out to the children in need.

Share the Warmth Winter is the brainchild of Michael van Niekerk who is the SRC member in charge of the portfolio. He received the idea for such a project from an initiative he is a part of at Mooiplaas Township. “People make shoeboxes with presents inside for children and hand them out during Christmas. I thought it would be a great idea to share the warmth in winter, especially in the freezing Free State,” he said.

The team managed to collect more than 100 items in just a few weeks. The distribution of the boxes will take place around the Bloemfontein area. Teams will visit shelters, while others will hand out the boxes directly to children in places like Heidedal and downtown.

“I am very delighted by the response and think that this is something that needs to grow bigger and bigger to include the entire Bloemfontein every winter,” said Michael when asked if it is a once-off project. People who would like to bring warmth to the little ones, can still send boxes or packages to the SRC Building or send an email to vanniekerkm@ufs.ac.za for more information.

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