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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Vice-Chancellor’s Award for Excellence in Teaching goes to trailblazer Dr Aliza le Roux
2013-11-15

 

Dr Aliza le Roux
Photo: Supplied
15 November 2013

 

Dr Aliza le Roux, Subject Head in the Department of Zoology and Entomology at the UFS Qwaqwa Campus, is this year’s winner of the Vice-Chancellor’s Award for Excellence in Teaching.

It came as no surprise. Dr le Roux has already been piling up numerous awards as a result of her outstanding work as an academic who is also an NRF-rated researcher.

In 2012, she joined the Teaching and Learning Champions group, which inspired her to take a more scholarly, research-focused approach to her teaching. Dr Le Roux has had huge successes in her teaching at the Qwaqwa Campus, propelling student pass rates from less than 50% to more than 90% in one course. As part of her approach, she makes use of interventions such as pre-class quizzes on Blackboard.

She is also doing Action Research on the teaching method known as ‘flipping’ the classroom, a process that essentially reversed traditional teaching practice. Dr le Roux is also looking into the impact of introducing Zotero (a free user-friendly online tool for research purposes) on the Qwaqwa Campus.

Her primary research outside of the classroom focuses on the evolution of wild mammals’ cognitive abilities. Dr le Roux and her students are starting fieldwork in November this year, investigating how paternal care impacts bat-eared foxes’ physical and cognitive development.

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