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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Gate re-opens to allow limited access
2014-01-29

The end of 2013 has marked the escalation of the university’s stranglehold on crime. With the launch of the B|Smart Campaign, the entire Kovsie community has been sharpening their safety senses.

Amidst this drive towards increased safety on the Bloemfontein Campus, the university has made an interim decision to close one of the gates. As from 1 October 2013, the gate at Badenhorst Street in Universitas near Roosmaryn residence has been closed for traffic.

As the safety initiative is gaining momentum, the matter of the closed gate has recently been reviewed. The university provisionally decided to re-open the gate to grant limited entry for vehicles and pedestrians, with immediate effect.

Only staff and students of the university, and legitimate visitors to the Bloemfontein Campus, will be allowed access. The gate will only be open during weekdays between:

  • 06:30 – 08:30 and
  • 16:00 – 18:00.

No entry will be allowed during weekends, as has been the case in the past.

“A student or staff card will ensure easy access and anybody else would have to validate their reason for entering,” explained Mokgawa Kobe, Director of Protection Services. Legitimate visitors will have to explain or prove their reason for wishing to enter the campus, he said. Absolutely no thoroughfare will be allowed.

Electronic access control is being implemented and as soon as this has been completed, the gate will be fully operational again.

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