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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Husband and wife make formidable team as they simultaneously receive a PhD
2014-12-12

Stellah Nambalirwa Lubinga and Moses Herbert Lubinga – a married couple – each received their Doctoral degrees at our 2014 Summer Graduation Ceremony. Their PhDs are in Public Administration and Management and Agricultural Economics respectively.

Dr Stellah Lubinga’s thesis is titled ‘The role of democratic rights and obligations of citizens in enhancing public service delivery in Uganda’. Her research makes a valuable contribution to a subject that has been under the spotlight in Uganda for some time. She contends that citizens need to exercise their rights to participate in planning for service delivery. In the absence of their participation, the quality of such services will remain sub-standard. Dr Stellah Lubinga proposes far-reaching interventions for ensuring constructive citizen involvement in the planning processes of service delivery.

Dr Moses Lubinga developed a set of Horticultural indices to be used as proxies in evaluating the impact of climate change on horticultural trade flows to the European Union market. His thesis is titled ‘The impact of climate change and the European Union GSP-Scheme on East Africa’s Horticultural Trade’. His methodological contribution lays the foundation for the future assessment of international trade flows from agriculturally-driven economies in informing policy-makers on the formulation of international trade policy – to the ultimate benefit of the nations in question.

The husband and wife Doctoral graduates originate from Kampala, Uganda, and have lectured and held several other positions in Ugandan and South African educational institutions. They continue to make great contributions in their respective fields of work.

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