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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Faculty of Health Sciences celebrates various successes
2015-01-12

The Faculty of Health Sciences at the University of the Free State achieved a number of successes in the course of 2014. This included awards, presentations and keynote addresses at conferences, as well as publications in various journals.

Some of the highlights are:

• Dr Madelein Koning from the Department of Internal Medicine received the Vice-Chancellor’s award for Excellence in Teaching and Learning during November. Prof Alan St Claire Gibson said the award is richly deserved, given Dr Koning’s many years of high-quality teaching and input to particularly the fifth-year MB ChB students.

• Prof Schalk Wentzel, Head of the Department of Urology, was elected President of the South African College of Urology, and Prof Alicia Sherriff from the Department of Oncology was elected President of the South African College of Oncology.  Prof William Rae was appointed to the College of Radiologists. These are the highest and most prestigious offices an academic clinician can hold or be elected to in the specialty of their choice. Prof Rae also published an article in the Journal of Infectious Diseases. 

• Prof Nats Mofolo, Head of the Department of Family Medicine, gave a keynote address at the Free State Health Indaba hosted by the Free State Department of Health.

• Dr Holtzhausen from the Department of Sports and Exercise Medicine chaired and delivered a presentation at the 6th Clinical Sport and Exercise Medicine Conference of SA held in Cape Town from 22 to 24 October 2014. He was also the convener of the conference. His presentation was titled ‘Safer exercise in apparently healthy individuals and those with possible risk factors for chronic disease and injury’.

 

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