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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Wayde van Niekerk sets new African record
2015-06-11


Wayde van Niekerk

Eight years before Wayde van Niekerk was born, Gabriel Tiacoh set a record of 31.74 in a 300m race. Now, 7 June 2015 has been marked as the historic day when the University of the Free State student sprinted 300m in 31.63 seconds at the Diamond League meeting in Birmingham.


Van Niekerk improved on his 2011 personal best 300m finish of 33.32 seconds, set in Stellenbosch. The African championship silver medalist said setting a new African record was “a blessing that I cannot really explain. Everything I achieve is God’s work.”

“What drives me is my family and friends, and the fact that I know my gift comes from God so running is my way of thanking the Lord,” he added.


Odessa Swarts, his mother, expressed how proud she is of her son. “I believe and trust with his faith in our heavenly father he is destined to become one of the greats South Africa has ever produced.”


His coach, Ans Botha, expressed her satisfaction, although she described his feat as “a little bit unexpected.” She said Van Niekerk’s achievement indicates that they are in the right track en route to the International Association of Athletics Federations (IAAF) World Championships in Beijing.


Van Niekerk is at present preparing for a 400m Adidas Grand Prix event in New York this Saturday.

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