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19 July 2018 Photo Supplied
AEVGI advances Next-Generation Sequencing in Africa
Prof George Armah, Noguchi Memorial Institute for Medical Research, Ghana; Prof Carl Kirkwood, Bill and Melinda Gates Foundation, USA; Cornelius Hagenmeier, Director: Internationalisation, UFS; Prof Gert van Zyl, Dean: Health Sciences; Dr Martin Nyaga, Senior Lecturer in the NGS Unit; Prof Joyce Tsoka-Gwegweni, Vice-Dean: Health Sciences; Dr Glen Taylor, Senior Director: Research and Development; Prof Jeffrey Mphahlele, Vice-President, South African Medical Research Council.

The inaugural edition of the University of the Free State (UFS) Next-Generation Sequencing (NGS) Data and Bioinformatics Workshop, hosted by the UFS-NGS Unit in the UFS Faculty of Health Sciences, marked a new beginning for the advancement of NGS in Africa under the auspices of the African Enteric Viruses Genome Initiative (AEVGI), which was recently funded by the Bill and Melinda Gates Foundation.

The AEVGI will generate rotavirus genomes at the UFS-NGS Unit to investigate the long-term effects of the introduction of the monovalent RV1 vaccine in three African countries – Ghana, Malawi, and South Africa.

The workshop attracted over 90 participants from 15 national and international institutions, with organisations from seven different countries as well as company representatives attending the event. The workshop kicked off with a courtesy call to the Rector and Vice-Chancellor, Prof Francis Petersen, followed by a stakeholder meeting with the executive management of the UFS.

The funding was secured through an award to the principal investigator, Dr Martin Nyaga, and sub-awards to co-investigators, Dr Khuzwayo Jere, Dr Francis Dennis, and Dr Valentine Ndze. According to attendee evaluations of the workshop, the remarkable performance of the workshop instructors was outstanding. Through practical sessions, participants were equipped with knowledge on how to apply several tools of genetic data analysis, using the rotavirus genome as a model to construct and interpret different genomic datasets.

A total of 65 students attended the hands-on workshop, the majority of which were from South African higher-education institutions. The organisers are grateful to the sponsors, particularly to the Bill and Melinda Gates Foundation and the University of the Free State, for making the workshop a success. Whitehead Scientific and the South African Medical Research Council also played a major role in the success of the workshop. The local organising committee consisted of Dr Martin Nyaga (host, convener and chair), Dr Saheed Sabiu (secretary), and Mr Stephanus Riekert (principal ICT support).

News Archive

Investigations into incidents on the Bloemfontein Campus: 22-26 February 2016
2016-03-16

Investigations underway into incidents relating to the Varsity Cup rugby match at Xerox Shimla Park and all other criminal acts occurring during protest action

The senior leadership of the University of the Free State (UFS) commissioned a number of investigations into incidents relating to the Varsity Cup rugby match at Xerox Shimla Park on 22 February 2016, as well as into acts of criminal conduct occurring throughout the protest action in the week of 22 to 26 February 2016.

These investigations include:

1. An independent commission led by senior officials in the judiciary. The enquiry will establish the events before and leading up to the match, the tragedy on the field itself, and events immediately afterwards as the crisis spread around the campus, including the incident at Vishuis Men’s Residence the same night.
2. An inquiry about disciplinary and criminal responsibility. This includes the responsibility of students, staff where applicable, and outsiders on campus before, during and after the match, and during the protest action in the week of 22 to 26 February 2016. This will enable the university to take action for disciplinary purposes and to enable the laying of charges with the South African Police Service (SAPS) in criminal cases.
3. Led by the core team of 2006 auditors who did the first study on the transformation of the UFS, an empirical account will be provided on how far, or not, the university has come since the first comprehensive study on the subject. This report in part addresses the charge from some students or student leaders that nothing has changed or that transformation has not happened at the UFS.

The UFS Council endorsed and gave its full support to the investigations during its quarterly meeting on 11 March 2016.

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