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08 September 2020 | Story Leonie Bolleurs | Photo Falko Buschke
Dr Falko Buschke says the iconic sandstone cliffs of the eastern Free State are key to protecting wild plants and animals from climate change.

The iconic sandstone cliffs of the eastern Free State are often the focus of paintings and postcards. Now, new research shows they also protect wild plants and animals from climate change. This finding is the outcome of a collaborative research effort by the University of the Free State (UFS); BirdLife South Africa; the Vrije Universiteit Brussel and KU Leuven, Belgium, which has recently been published in the journal Biological Conservation.

Mountains key for climate change mitigation

The study, led by Dr Falko Buschke from the Centre for Environmental Management UFS, used satellite data from NASA to track the ecological effects of wet and dry seasons, including the record drought of 2015/16. This showed how vegetation on the cool and moist mountain slopes was less affected by dry spells.

The complex physical terrain allows moisture to accumulate in the shaded parts of the south-facing slopes and ravines. This creates cool and moist habitats for plants and animals that wouldn’t survive in the rest of the hotter and drier landscape.

The team also discovered that these positive effects of mountains do not end at the foot of the mountain, but extend at least 500m into the flatter lowlands. “Presumably because water and nutrients accumulate in these surrounding buffers due to run-off,” says Dr Buschke.

Butterflies find safety on mountains

In addition to their high-tech analysis of the area, the team also relied on old-fashioned fieldwork to monitor butterflies over two years. “The data showed us how these insects find safety on mountains during harsh climate conditions and can then recolonise the rest of the landscape after conditions improve,” explains Dr Buschke. “This gives us clues on the best way to protect nature,” he adds. 

This study took place in the Rooiberge-Riemland Key Biodiversity Area (KBA), an area significant for maintaining global biodiversity. Several species of insects, reptiles, birds and mammals here occur nowhere else on earth. “If they disappear here, they will go extinct from the whole planet forever,” says Dr Falko Buschke. 

Despite its ecological significance, most of the area is covered by commercial farmland. So, the next stage of the project is exploring ways of protecting these important habitats while ensuring that farmers can continue producing food and supporting rural livelihoods. 

Farmers hold the key to preserving biodiversity,” says Dr Buschke, “so conservation scientists need to work closely with them to ensure that we protect species for future generations.” 

News Archive

Newly operational sequencing unit in genomics at UFS
2016-09-09

Description: Next Generation Sequencing  Tags: Next Generation Sequencing

Dr Martin Nyaga and his research assistant,
Tshidiso Mogotsi in the Next Generation
Sequencing Laboratory.
Photo: Charl Devenish

The Next Generation Sequencing (NGS) unit at the UFS was established as an interdisciplinary facility under the Directorate for Research Development, Faculty of Health Sciences and Faculty of Natural and Agricultural Sciences.

The aim of the NGS facility is to aid internal and external investigators undertaking studies on Deoxyribonucleic acid (DNA) sequencing, assembly and bioinformatics approaches using the more advanced Illumina MiSeq NGS platform.

The NGS unit became operational in 2016 and is managed by Dr Martin Nyaga and administered through the office of the Dean, Faculty of Health Sciences, under the leadership of Prof Gert Van Zyl. Dr Nyaga has vast experience in microbial genomics, having done his PhD in Molecular Virology.

He has worked and collaborated with globally recognised centres of excellence in Prokaryotic and Eukaryotic genomics, namely the J. Craig Venter Institute and the Laboratory of Viral Metagenomics, Rega Institute, among others.

The unit has undertaken several projects and successfully generated data on bacterial, viral and human genomes. Currently, work is ongoing on bacterial and fungal metagenomics studies through 16S rRNA sequencing.

In addition, the unit is also working on plasmid/insert sequencing and whole genome sequencing of animal and human rotaviruses. The unit has capacity to undertake other kinds of panels like the HLA, Pan-cancer and Tumor 15 sequencing, among others.

Several investigators from the UFS including but not limited to Prof Felicity Burt, Prof Wijnand Swart, Dr Frans O’Neil, Dr Trudi O'Neill, Dr Charlotte Boucher, Dr Marieka Gryzenhout and Dr Kamaldeen Baba are actively in collaboration with the NGS unit.

The unit has also invested in other specialised equipment such as the M220 Focused-ultrasonicator (Covaris), 2100 Bioanalyzer system (Agilent) and the real-time PCR cycler, the Rotor-Gene Q (Qiagen), which both the UFS and external investigators can use for their research.

Investigators working on molecular and related studies are encouraged to engage with Dr Nyaga on how they would like to approach their genomics projects at the UFS NGS unit. 

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