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30 December 2019 | Story Thabo Kessah | Photo Thabo Kessah
Gavin Dollman
Gavin Dollman is involved in virtual prospecting for fossils using a drone.

Gavin Dollman is one of the young researchers selected for the international research programme funded through the US-SA Higher Education Network. This prestigious programme is aimed at giving PhD candidates and their supervisors the opportunity to regularly travel to the USA and spend time at participating US universities where their co-promoters will be based.

“The University Staff Doctoral Programme (USDP) has allowed me to bring my idea of collaborative science to fruition. It’s an exciting opportunity,” Dollman said.

Dollman added that his PhD studies would focus on the machine and deep learning for prospecting for palaeontology. He is studying with the Appalachian State University. Other participating universities are Montana and Colorado State.

He has also had the privilege to work alongside a team of Geologists and Paleontologists from the universities of Birmingham, Zurich and Oxford in a project under the auspices of the University of the Witwatersrand’s Evolution Studies Institute (ESI) on a site in rural Eastern Cape.

“My role within this massive project is to perform a detailed survey of the sites and the surrounding area for later analysis. I used a drone known as the DJI Phantom 3 Pro with which I took hundreds of pictures that were later put together to create a detailed map,” he said.

“The maps allowed for virtual prospecting by the team and will in the long term serve as the basis for a predictive fossil model for the area.”

Dollman is a lecturer in the Department of Computer Science and Informatics on the Qwaqwa Campus.

News Archive

Mathematical methods used to detect and classify breast cancer masses
2016-08-10

Description: Breast lesions Tags: Breast lesions

Examples of Acho’s breast mass
segmentation identification

Breast cancer is the leading cause of female mortality in developing countries. According to the World Health Organization (WHO), the low survival rates in developing countries are mainly due to the lack of early detection and adequate diagnosis programs.

Seeing the picture more clearly

Susan Acho from the University of the Free State’s Department of Medical Physics, breast cancer research focuses on using mathematical methods to delineate and classify breast masses. Advancements in medical research have led to remarkable progress in breast cancer detection, however, according to Acho, the methods of diagnosis currently available commercially, lack a detailed finesse in accurately identifying the boundaries of breast mass lesions.

Inspiration drawn from pioneer

Drawing inspiration from the Mammography Computer Aided Diagnosis Development and Implementation (CAADI) project, which was the brainchild Prof William Rae, Head of the department of Medical Physics, Acho’s MMedSc thesis titled ‘Segmentation and Quantitative Characterisation of Breast Masses Imaged using Digital Mammography’ investigates classical segmentation algorithms, texture features and classification of breast masses in mammography. It is a rare research topic in South Africa.

 Characterisation of breast masses, involves delineating and analysing the breast mass region on a mammogram in order to determine its shape, margin and texture composition. Computer-aided diagnosis (CAD) program detects the outline of the mass lesion, and uses this information together with its texture features to determine the clinical traits of the mass. CAD programs mark suspicious areas for second look or areas on a mammogram that the radiologist might have overlooked. It can act as an independent double reader of a mammogram in institutions where there is a shortage of trained mammogram readers. 

Light at the end of the tunnel

Breast cancer is one of the most common malignancies among females in South Africa. “The challenge is being able to apply these mathematical methods in the medical field to help find solutions to specific medical problems, and that’s what I hope my research will do,” she says.

By using mathematics, physics and digital imaging to understand breast masses on mammograms, her research bridges the gap between these fields to provide algorithms which are applicable in medical image interpretation.

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