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30 December 2019 | Story Thabo Kessah | Photo Rian Horn
UFS Qwaqwa Campus
Hundreds of international botanists will be attending the 46th SAAB Annual Conference on the Qwaqwa Campus.

The University of the Free State Qwaqwa Campus is gearing up to host the 46th Annual Conference of the South African Association of Botanists from 7 to 10 January 2020. Talking about the choice of venue, Chairperson of the Local Organising Committee, Dr Sandy-Lynn Steenhuisen, said the unique setting in the shadow of the Maloti-Drakensberg Mountains highlights the Qwaqwa Campus as a fantastic base for interdisciplinary montane studies. “This is the home of the Afromontane Research Unit (ARU), and it will also give the delegates an opportunity to explore a treasure trove of botanical diversity on a post-conference tour to the top of the Amphitheatre in the Northern Drakensberg,” she said.

International delegates

“The conference will be attended by approximately 250 delegates representing at least 10 countries.  We are very excited to host two international and two national plenaries, namely Prof Peter Linder (University of Zürich), Prof Felipe Amorim (São Paulo State University – UNESP), Prof Annah Moteetee (University of Johannesburg), and our Young Botanist award winner from SAAB 2019, Ryan Rattray from GeneLethu Laboratories.”

SAAB 2020 is open to all researchers, industry partners, and citizen scientists from any botanical field. “The theme will embrace Qwaqwa’s cultural heritage by using the Sesotho phrase ‘Dimela ke bophelo’, which translates to ‘Plants are life’. This theme emphasises the dependence of all earthly life on plants. Delegates are offered the opportunity to book residence accommodation adjacent to the conference venue, and our conference organisers, XL Millennium, are eager to help with registration and any travel arrangements,” she added.

Botanists to be awarded

The conference will also be honouring botanists for their lifetime contributions to the field of plant sciences with the awarding of gold and silver medals, and the best doctoral thesis from the previous year with a bronze medal. These will be awarded during the gala dinner at the end of the conference.

News Archive

Newly operational sequencing unit in genomics at UFS
2016-09-09

Description: Next Generation Sequencing  Tags: Next Generation Sequencing

Dr Martin Nyaga and his research assistant,
Tshidiso Mogotsi in the Next Generation
Sequencing Laboratory.
Photo: Charl Devenish

The Next Generation Sequencing (NGS) unit at the UFS was established as an interdisciplinary facility under the Directorate for Research Development, Faculty of Health Sciences and Faculty of Natural and Agricultural Sciences.

The aim of the NGS facility is to aid internal and external investigators undertaking studies on Deoxyribonucleic acid (DNA) sequencing, assembly and bioinformatics approaches using the more advanced Illumina MiSeq NGS platform.

The NGS unit became operational in 2016 and is managed by Dr Martin Nyaga and administered through the office of the Dean, Faculty of Health Sciences, under the leadership of Prof Gert Van Zyl. Dr Nyaga has vast experience in microbial genomics, having done his PhD in Molecular Virology.

He has worked and collaborated with globally recognised centres of excellence in Prokaryotic and Eukaryotic genomics, namely the J. Craig Venter Institute and the Laboratory of Viral Metagenomics, Rega Institute, among others.

The unit has undertaken several projects and successfully generated data on bacterial, viral and human genomes. Currently, work is ongoing on bacterial and fungal metagenomics studies through 16S rRNA sequencing.

In addition, the unit is also working on plasmid/insert sequencing and whole genome sequencing of animal and human rotaviruses. The unit has capacity to undertake other kinds of panels like the HLA, Pan-cancer and Tumor 15 sequencing, among others.

Several investigators from the UFS including but not limited to Prof Felicity Burt, Prof Wijnand Swart, Dr Frans O’Neil, Dr Trudi O'Neill, Dr Charlotte Boucher, Dr Marieka Gryzenhout and Dr Kamaldeen Baba are actively in collaboration with the NGS unit.

The unit has also invested in other specialised equipment such as the M220 Focused-ultrasonicator (Covaris), 2100 Bioanalyzer system (Agilent) and the real-time PCR cycler, the Rotor-Gene Q (Qiagen), which both the UFS and external investigators can use for their research.

Investigators working on molecular and related studies are encouraged to engage with Dr Nyaga on how they would like to approach their genomics projects at the UFS NGS unit. 

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