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28 December 2020 | Story André Damons | Photo Supplied
Dr Michael Pienaar is a lecturer in the University of the Free State’s (UFS) department of Paediatrics and Child Health.

A lecturer from the University of the Free State’s (UFS) department of Paediatrics and Child Health is investigating the use of artificial neural networks to develop models for the prediction of patient outcomes in children with severe illness.

Dr Michael Pienaar, senior lecturer and specialist, is conducting this research as part of his doctoral research and the study deals primarily with the development of models that are designed and calibrated for use in South Africa. These artificial neural networks are computer programs designed to mimic some of the learning characteristics of biological neurons.

The potential applications of models

According to Dr Pienaar these models have traditionally been developed in high-income nations using conventional statistical methods.

“The potential applications of such models in the clinical setting include triage, medical research, guidance of resource allocation and quality control. Having initially begun this research investigating the prediction of mortality outcomes in the paediatric intensive care unit (PICU) I have broadened my scope to patients outside of PICU, seeking to identify children early during their illnesses who are at risk of serious illness requiring PICU,” says Dr Pienaar.

The research up until now has been directed towards the identification of characteristics that are both unique to children with serious illness in South Africa, but also accessible to clinicians in settings where expertise and technical resources are limited.

Research still in the early changes

The research is still in its early stages but next year a series of expert review panels will be held to investigate the selection of variables for the model, after which the collection of clinical data will begin. Once the data has been collected and prepared, a number of candidate models will be developed and evaluated. This should be concluded by the end of 2022.

Says Dr Pienaar: “The need to engage with the rapid proliferation of technology, particularly in the realms of machine learning, mobile technology, automation and the Internet of Things is as great in medical research now as it is in any academic discipline.

“It is critical that research, particularly in South Africa, engage with this in order to take advantage of the opportunities offered and avoid the dangers that go paired with them. Together with the technology as such, it has been essential to pursue this project as an interdisciplinary undertaking involving clinicians, biostatisticians and computer engineers.”

Hope for the research  

Dr Pienaar says he was very fortunate and grateful to be the recipient of a generous interdisciplinary grant from the UFS which has allowed him to procure software and equipment that is critical to this project.

“The hope for this research is that the best performing of these models can be integrated with a mobile application that assists practitioners in a wide range of settings in the identification, treatment and early referral of children at high risk of severe illness. I would like to expand this research project to include other countries in Africa and South America and to use it as a bridge to collaboration with other clinical researchers in the Global South,” says Dr Pienaar.

As an early career researcher, Dr Pienaar hopes that this research can serve as a platform to build a body of research that uses the rapid technological advances of these times together with a wide range of collaborations with other disciplines in the pursuit of better child health.

He concludes by saying that he has had excellent support thus far from his supervisors, Prof Stephen Brown (Faculty of Health Sciences, UFS), Dr Nicolaas Luwes (Faculty of Computer Science and Engineering, Central University of Technology) and Dr Elizabeth George (Medical Research Council Clinical Trials Unit, University College London). I have also been supported by the Robert Frater Institute in the Faculty of Health Sciences.

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Prof Danie Vermeulen appointed as dean of the Faculty of Natural and Agricultural Sciences
2016-03-18

Description: Prof Danie Vermeulen Tags: Prof Danie Vermeulen

As the new dean of the UFS Faculty of Natural and Agricultural Sciences, Prof Danie Vermeulen is resolute to place this faculty on the world map.
Photo: Anja Aucamp

The Council of the University of the Free State (UFS) approved the appointment of Prof Danie Vermeulen as dean of the Faculty of Natural and Agricultural Sciences during its meeting on 11 March 2016.

“Prof Vermeulen brings to the position of dean a set of formidable research and leadership achievements and a track-record of commitment to equity and diversity in the sciences," said Prof Jonathan Jansen, Vice-Chancellor and Rector of the UFS.

“It is a great honour that was bestowed on me to lead the faculty and it makes me feel very humble," said Prof Vermeulen.

Fifteen years ago, Prof Vermeulen joined the UFS as a researcher and lecturer. From 2007-2009 he filled the role of acting director of the UFS Institute for Groundwater Studies to subsequently be appointed as not only the director of this institute, but also associate Professor in Geohydrology.

As an alumnus, Prof Vermeulen has strong ties to the UFS. He acquired a BSc Honours, MSc, and PhD Cum Laude in Geohydrology here.This pursuit of excellence also transpires in his aspirations for the faculty’s future. “My vision is that the faculty becomes the best in South Africa in various departments – and recognised throughout Africa, especially in the applied sciences. In addition, the faculty will actively interact with world-leading universities, particularly in the hard sciences.”

Prof Vermeulen is a member of the Executive Committee of the Free State branch of the Groundwater Division of South Africa, member of the Executive Council of the International Mine Water Association, as well as council member at the Fossil Fuel Foundation of South Africa. In the past, he has held membership at the International Association of Hydrogeologists, South African Council for Natural Scientific Professions, Ground Water Division of the Geological Society of South Africa, Water Institute of South Africa, FETWATER Groundwater Initiative, and Editorial Board member of the scientific journal, Water SA.

Prof Vermeulen served as the acting dean for six months prior to his appointment. His appointment commences on 1 April 2016 for a period of five year.

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