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28 December 2020 | Story André Damons | Photo Supplied
Dr Michael Pienaar is a lecturer in the University of the Free State’s (UFS) department of Paediatrics and Child Health.

A lecturer from the University of the Free State’s (UFS) department of Paediatrics and Child Health is investigating the use of artificial neural networks to develop models for the prediction of patient outcomes in children with severe illness.

Dr Michael Pienaar, senior lecturer and specialist, is conducting this research as part of his doctoral research and the study deals primarily with the development of models that are designed and calibrated for use in South Africa. These artificial neural networks are computer programs designed to mimic some of the learning characteristics of biological neurons.

The potential applications of models

According to Dr Pienaar these models have traditionally been developed in high-income nations using conventional statistical methods.

“The potential applications of such models in the clinical setting include triage, medical research, guidance of resource allocation and quality control. Having initially begun this research investigating the prediction of mortality outcomes in the paediatric intensive care unit (PICU) I have broadened my scope to patients outside of PICU, seeking to identify children early during their illnesses who are at risk of serious illness requiring PICU,” says Dr Pienaar.

The research up until now has been directed towards the identification of characteristics that are both unique to children with serious illness in South Africa, but also accessible to clinicians in settings where expertise and technical resources are limited.

Research still in the early changes

The research is still in its early stages but next year a series of expert review panels will be held to investigate the selection of variables for the model, after which the collection of clinical data will begin. Once the data has been collected and prepared, a number of candidate models will be developed and evaluated. This should be concluded by the end of 2022.

Says Dr Pienaar: “The need to engage with the rapid proliferation of technology, particularly in the realms of machine learning, mobile technology, automation and the Internet of Things is as great in medical research now as it is in any academic discipline.

“It is critical that research, particularly in South Africa, engage with this in order to take advantage of the opportunities offered and avoid the dangers that go paired with them. Together with the technology as such, it has been essential to pursue this project as an interdisciplinary undertaking involving clinicians, biostatisticians and computer engineers.”

Hope for the research  

Dr Pienaar says he was very fortunate and grateful to be the recipient of a generous interdisciplinary grant from the UFS which has allowed him to procure software and equipment that is critical to this project.

“The hope for this research is that the best performing of these models can be integrated with a mobile application that assists practitioners in a wide range of settings in the identification, treatment and early referral of children at high risk of severe illness. I would like to expand this research project to include other countries in Africa and South America and to use it as a bridge to collaboration with other clinical researchers in the Global South,” says Dr Pienaar.

As an early career researcher, Dr Pienaar hopes that this research can serve as a platform to build a body of research that uses the rapid technological advances of these times together with a wide range of collaborations with other disciplines in the pursuit of better child health.

He concludes by saying that he has had excellent support thus far from his supervisors, Prof Stephen Brown (Faculty of Health Sciences, UFS), Dr Nicolaas Luwes (Faculty of Computer Science and Engineering, Central University of Technology) and Dr Elizabeth George (Medical Research Council Clinical Trials Unit, University College London). I have also been supported by the Robert Frater Institute in the Faculty of Health Sciences.

News Archive

Plant researcher receives prestigious Grain SA award
2016-10-21

Description: Plant researcher receives prestigious Grain SA award Tags: Plant researcher receives prestigious Grain SA award

Prof Zakkie Pretorius from the UFS Department
of Plant Sciences with Andries Theron,
vice-chairman of Grain SA. Theron presented
the award to Prof Pretorius at Grain SA’s a
nnual gala event, which was held in Midrand
this year.
Photo (read more): Supplied
Photo (spotlight): Charl Devenish

A researcher in the Department of Plant Sciences at the University of the Free State (UFS), Prof Zakkie Pretorius, received the prestigious Grain Producer of the Year Inspiration Award during the annual gala event of Grain SA. Grain SA provides strategic commodity support and services to South African grain producers to assist in the sustainability of the sector.

This award is presented to individuals or organisations in appreciation of excellent contributions to the grain industry. These individuals have also achieved extraordinary results in their respective fields.

Research in the interest of food security
Prof Pretorius has been involved in research on plant diseases and food crops for the past 38 years. His research focus, rust diseases in crops, is especially important for food security.  

According to Prof Pretorius, who collaborates with an extensive network of specialist colleagues, his research covers a variety of topics including rust race identification, the discovery of new resistance genes, characterisation of resistance expression in plants, and the mapping of genes. His focus is not only on wheat, but he also researches rust diseases in oats, barley, maize, dry beans, lentils, sunflowers, and soybeans.

Breeding of rust-resistant varieties gains scientific basis
Locally, he has been contracted for several years by the Winter Grain Trust to annually evaluate commercial wheat cultivars and elite germplasm. This information is regularly passed on to the relevant seed companies and breeders, and is also included in the production guidelines of the Agricultural Research Council for disease risk assessment. His research places the breeding and selection of rust-resistant varieties on a solid scientific foundation. A living collection of rust fungus cultures and a large germplasm collection are maintained at the UFS under his supervision.

 

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