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03 January 2020 | Story Leonie Bolleurs | Photo Leonie Bolleurs
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Dr Sandy Steenhuisen conducts research on invasive alien plants and the effect they have on the environment.

South Africa, and more specifically the Free State, is known as a drought-stricken area. Invasive alien plants are gulping up much-needed water resources, draining our land. 

Pollination ecologist, Dr Sandy-Lynn Steenhuisen, who is also expanding into invasive alien research, is conducting research on the reproductive ecology of exotic plant species in montane grasslands. As an affiliate of the Afromontane Research Unit (ARU) and Senior Lecturer in the Department of Plant Sciences at the University of the Free State (UFS), this research is conducted with her students and a host of collaborators from Rhodes University (Centre for Biological Control), Stellenbosch University (Centre for Invasion Biology), and the University of KwaZulu-Natal.  

She says substantial funding is being made available for research on invasive species due to the extent of the problem nationally and globally. Their research is being funded and conducted in collaboration with plant ecology experts, Dr Kim Canavan (Rhodes University), Dr Grant Martin (Rhodes University), Prof David Richardson (Stellenbosch University), and Prof Colleen Downs (University of KwaZulu-Natal), as well as UFS postgraduate students Anthony Mapaura and Lehlohonolo Donald Adams, and UFS postdoctoral fellow, Dr Nicholas Le Maitre. 

Besides working with a host of collaborators, the ARU was this year also invited to join the prestigious Mountain Invasion Research Network (MIREN), a global network of academics who are passionate about understanding the invasion of mountains by non-native species and its impact on local mountain ecologies.  

Black Wattle makes rivers run dry 

Alien plant species that often escape from planted gardens or plantations, thrive in disturbed, mismanaged and eroded areas. One of the biggest issues regarding alien plant invasion is that many people are not aware of the harmful effects it has on the environment, and that they continue to plant it or allow invaders to spread. 

A large percentage of trees in urban South Africa are invasive alien trees. They dry out the soil and displace our native plants. Coming from other countries and without their former enemies or competitors, they flourish. Our indigenous plants are not used to these plants and are easily displaced.  

An example of a very aggressive invasive alien plant in the region, and in South Africa as a whole, is Black Wattle. It uses excessive water, so bad that rivers run dry and riverbanks become eroded. It also chemically excludes many native plants from growing among them. 

Research content 1
Anthony Mapaura’s research focuses on Nassella, an invasive alien grass in the elevated areas of the Eastern Cape mountains.
This plant is extremely difficult to control and is the cause of a large number of  cattle dying. (Photo: Leonie Bolleurs)

This species is very hard to control. If you burn it or cut it off, it will grow back. In addition, it drops a great number of seeds into the soil, spreading without any difficulty.  

Another invader, Yellow Firethorn, which is being investigated by master’s student Adams, invades high-elevation grassland areas, reducing grazing potential and ultimately leading to unproductive farmland and choked rivers.  

“Our mountain grassland systems are not adapted to compete with the invasion of these alien trees. Since they are using excessive water resources, natural streams should return in many instances if they are removed,” says Dr Steenhuisen. 

Nassella displacing indigenous plants 

Mapaura focuses his doctoral study on an invasive grass genus, Nassella, originating from the Americas. Growing in the elevated areas of the Eastern Cape mountains, this species is the cause of a large number of cattle dying.  

The plant, which is not palatable and consists mostly of fibre, is eaten by cattle – especially during dry seasons when there is not much natural grazing available. It is difficult to digest, forming a ball in the stomach of the animals that ultimately results in death.  

“It is extremely difficult and costly to control, and natural grasses cannot compete with it. In Australia, many farmers have had to abandon their farms once these plants invaded, as the cost of control was higher than the value of the land. A similar situation could unfold in South Africa, and it’s a race to learn all we can about the ecology of this genus to inform policy and practice,” says Dr Steenhuisen. 

The solution, fighting for survival 

She said to effectively address these invasions, we need to understand everything about the reproductive ecology of the plants to develop specific biological or chemical control methods to target and destroy the plant at an appropriate life stage. We also need to know if the plants are using native animals (if not just wind and water) to pollinate their flowers and spread their seeds. “Organisations investigating the effectiveness of biological control agents and chemical products will be able to use our research data on the plants’ ecology to focus efforts on specific life stages,” she adds. 

Invasive alien plants also contribute to South Africa losing the genetic integrity of certain native plants with which they hybridise. For example, pure genetic lines of native white stinkwood trees are potentially mixing with exotics and hybrids, adding to a loss of diversity and genetic purity – a project being undertaken by postdoctoral fellow, Dr Le Maitre.  

Dr Steenhuisen urges South Africans to plant the genetically pure South African white stinkwood trees, especially since alien species and hybrids are often sold by garden centres as if they were the indigenous species.  

Dr Vincent Ralph Clark, Head of the Afromontane Research Unit at the UFS, has a vision to start a nursery for high-elevation indigenous plants. “A great number of nurseries do not supply pure indigenous trees, but hybrids,” says Dr Steenhuisen.  

 

News Archive

Research eradicates bacteria from avocado facility
2017-01-17

 Description: Listeria monocytogenes Tags: Listeria monocytogenes

Listeria monocytogenes as seen under an electron
microscope. The photo was taken with a transmission
electron microscope at the microscopy unit of the UFS.
Bacteriophages (lollipop-like structures) can be seen
next to the bacterial cells.
Photo: Supplied

“The aim of my project was to identify and characterise the contamination problem in an avocado-processing facility and then to find a solution,” said Dr Amy Strydom, postdoctoral fellow in the Department of Microbial Biochemical and Food Biotechnology at the University of the Free State (UFS).

Her PhD, “Control of Listeria monocytogenes in an Avocado-processing Facility”, aimed to identify and characterise the contamination problem in a facility where avocados were processed into guacamole. Dr Strydom completed her MSc in food science in 2009 at Stellenbosch University and this was the catalyst for her starting her PhD in microbiology in 2012 at the UFS. The research was conducted over a period of four years and she graduated in 2016. The research project was funded by the National Research Foundation.

The opportunity to work closely with the food industry further motivated Dr Strydom to conduct her research. The research has made a significant contribution to a food producer (avocado facility) that will sell products that are not contaminated with any pathogens. The public will then buy food that is safe for human consumption.


What is Listeria monocytogenes?

Listeria monocytogenes is a food-borne pathogenic bacterium. When a food product is contaminated with L. monocytogenes, it will not be altered in ways that are obvious to the consumer, such as taste and smell. When ingested, however, it can cause a wide range of illnesses in people with impaired immune systems. “Risk groups include newborn babies, the elderly, and people suffering from diseases that weaken their immune systems,” Dr Strydom said. The processing adjustments based on her findings resulted in decreased numbers of Listeria in the facility.

The bacteria can also survive and grow at refrigeration temperatures, making them dangerous food pathogens, organisms which can cause illnesses [in humans]. Dr Strydom worked closely with the facility and developed an in-house monitoring system by means of which the facility could test their products and the processing environment. She also evaluated bacteriophages as a biological control agent in the processing facility. Bacteriophages are viruses that can only infect specific strains of bacteria. Despite bacteriophage products specifically intended for the use of controlling L. monocytogenes being commercially available in the food industry, Dr Strydom found that only 26% of the L. monocytogenes population in the facility was destroyed by the ListexP100TM product. “I concluded that the genetic diversity of the bacteria in the facility was too high and that the bacteriophages could not be used as a control measure. However, there is much we do not understand about bacteriophages, and with a few adjustments, we might be able to use them in the food industry.”

Microbiological and molecular characterisation of L. monocytogenes

The bacteria were isolated and purified using basic microbiological culturing. Characterisation was done based on specific genes present in the bacterial genome. “I amplified these genes with polymerase chain reaction (PCR), using various primers targeting these specific genes,” Dr Strydom said. Some amplification results were analysed with a subsequent restriction digestion where the genes were cut in specific areas with enzymes to create fragments. The lengths of these fragments can be used to differentiate between strains. “I also compared the whole genomes of some of the bacterial strains.” The bacteriophages were then isolated from waste water samples at the facility using the isolated bacterial strains. “However, I was not able to isolate a bacteriophage that could infect the bacteria in the facility.

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