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03 January 2020 | Story Leonie Bolleurs | Photo Leonie Bolleurs
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Prof Aliza le Roux and Dr Mpho Ramoejane at the vulture restaurant, nearly 30 km from Clarens. This is a safe space for vultures to feed, in an effort to increase their declining numbers.

Endangered bird species such as the Cape and bearded vultures attract bird enthusiasts from afar. These birds are close to extinction in Southern Africa and classified as near threatened on the International Union for Conservation Nature (IUCN) list, with a strong global decline in their numbers.  

A viewing hide constructed by honorary rangers in the Golden Gate Highlands National Park, about 30 km from Clarens in the Eastern Free State, offers tourists the opportunity to view and photograph the birds as they feed at one of South Africa’s close to 200 vulture restaurants. 

This tourist attraction is situated in a good location from a conservation perspective, with vulture colonies and – importantly – water close by, according to Prof Aliza le Roux

Prof Le Roux, Associate Professor in the Department of Zoology and Entomology on the Qwaqwa Campus of the University of the Free State (UFS) and affiliated to the Afromontane Research Unit (ARU), is working with one of her students, Agnes Mkotywa, on a study regarding the effectiveness of this feeding site. 

Poisoned carcasses big threat to vultures 

She said there are quite a few vulture restaurants in the area, with the most famous one at Giants Castle.  

A vulture restaurant is an area where park rangers drop non-poisoned carcasses, mostly donated by nearby farmers. Poisoned carcasses, bait for other animals such as jackals and caracals, are one of the biggest threats to vultures. 

The vulture restaurants, an effort to get vulture populations to grow, are within the reach of Cape and bearded vultures. But, as found in Mkotywa’s study, the initiative has its shortcomings.  

 

Prof Le Roux said the current structures are open, and black-backed jackals come to feed any time of the day and night. “There is more feeding of the jackals than the intended vultures, and the current structure does not protect the vultures against the jackals,” she said. Jackal activity at the vulture restaurant is significantly higher than elsewhere in the park, as supported by camera traps set up in the park by Dr Mpho Ramoejane, currently an ARU postdoctoral researcher. 

Raised platform a possible solution 

“This is one of our primary research findings. A possible solution is to put up fences. It will, however, keep everything else out and will be an eyesore from a tourist perspective. A raised platform that could exclude the jackals and still provide the vultures with a large landing place, might work,” Prof Le Roux added. 

Another finding was that carcasses are not dropped regularly enough. Vultures cannot predict when there will be food.  

These findings will be published in peer-reviewed outlets, but it will also be communicated to the management of the South African National Parks (SANParks) to address the problem. “SANParks is involved in the project and wants the information. They said they needed the information and will build on it,” said Prof Le Roux.  

Once the suggested changes are implemented, she is excited to scientifically document how these changes are making a difference. This has the potential to guide the management and development of vulture restaurants elsewhere in South Africa and the world. 

News Archive

Newly operational sequencing unit in genomics at UFS
2016-09-09

Description: Next Generation Sequencing  Tags: Next Generation Sequencing

Dr Martin Nyaga and his research assistant,
Tshidiso Mogotsi in the Next Generation
Sequencing Laboratory.
Photo: Charl Devenish

The Next Generation Sequencing (NGS) unit at the UFS was established as an interdisciplinary facility under the Directorate for Research Development, Faculty of Health Sciences and Faculty of Natural and Agricultural Sciences.

The aim of the NGS facility is to aid internal and external investigators undertaking studies on Deoxyribonucleic acid (DNA) sequencing, assembly and bioinformatics approaches using the more advanced Illumina MiSeq NGS platform.

The NGS unit became operational in 2016 and is managed by Dr Martin Nyaga and administered through the office of the Dean, Faculty of Health Sciences, under the leadership of Prof Gert Van Zyl. Dr Nyaga has vast experience in microbial genomics, having done his PhD in Molecular Virology.

He has worked and collaborated with globally recognised centres of excellence in Prokaryotic and Eukaryotic genomics, namely the J. Craig Venter Institute and the Laboratory of Viral Metagenomics, Rega Institute, among others.

The unit has undertaken several projects and successfully generated data on bacterial, viral and human genomes. Currently, work is ongoing on bacterial and fungal metagenomics studies through 16S rRNA sequencing.

In addition, the unit is also working on plasmid/insert sequencing and whole genome sequencing of animal and human rotaviruses. The unit has capacity to undertake other kinds of panels like the HLA, Pan-cancer and Tumor 15 sequencing, among others.

Several investigators from the UFS including but not limited to Prof Felicity Burt, Prof Wijnand Swart, Dr Frans O’Neil, Dr Trudi O'Neill, Dr Charlotte Boucher, Dr Marieka Gryzenhout and Dr Kamaldeen Baba are actively in collaboration with the NGS unit.

The unit has also invested in other specialised equipment such as the M220 Focused-ultrasonicator (Covaris), 2100 Bioanalyzer system (Agilent) and the real-time PCR cycler, the Rotor-Gene Q (Qiagen), which both the UFS and external investigators can use for their research.

Investigators working on molecular and related studies are encouraged to engage with Dr Nyaga on how they would like to approach their genomics projects at the UFS NGS unit. 

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