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08 October 2020 | Story Leonie Bolleurs | Photo Supplied
Dr Cornel Bender
Dr Cornel Bender received her PhD qualification at the virtual graduation ceremonies in October. The title of her thesis is: Stem rust resistance in South African wheat and triticale.

The rapid distribution of disease-causing organisms such as Ug99, a wheat stem-rust pathotype, pointed out just how vulnerable global cereal production is to disease outbreaks.

These cereals include wheat, barley, rye, oats, triticale, rice, maize, and millet and are one of the most important food sources for human consumption.

According to Dr Cornel Bender, the projected world population of 10 billion in 2057 requires a growth of more than 40% in cereal production. Wheat is grown on more hectares than any other cereal and is one of the most important sources of calories for humans. However, the growth rate of wheat yields has declined from the 1960s to the 1990s. Therefore, it is essential to increase global wheat production.

“With the regular appearance of more aggressive stem rust pathotypes in South Africa, there is a constant need to discover new sources of resistance, understand the genetic base of presently deployed sources in wheat, triticale and barley cultivars, and to manipulate the deployment of resistant sources through a more sustainable approach,” says Dr Bender.

Her PhD thesis, titled: Stem rust resistance in South African wheat and triticale, includes various fundamental aspects for the effective management of stem rust in South Africa.

Dr Bender is a Professional Officer in the Division of Plant Pathology in the Department of Plant Sciences, who received her PhD at the virtual graduation ceremonies in October.

Innovative and cost effective

Her promotors, Prof Zakkie Pretorius, Research Fellow, and Dr Willem Boshoff, Senior Lecturer in the Department of Plant Sciences, believe that she used an innovative approach to develop a cost-effective phenotyping method to select for more durable resistance types in a controlled greenhouse environment.

“In the past, results obtained from field trials used to assess adult plants for stem-rust resistance, were often influenced by abiotic factors, were seasonable in nature, expensive, and time consuming; therefore, the development of a dependable greenhouse screening system provides an important additional instrument for rust research,” says Dr Bender.

She adds that the greenhouse technique is used worldwide to screen for adult plant resistance and contribute to save time and money.

Broadening our knowledge

“Inheritance studies were undertaken to determine the genetic base of stem-rust resistance in selected South African wheat and triticale cultivars (developed from wheat/rye crosses) through seedling analysis as well as greenhouse and fieldwork,” she says.

Dr Bender believes the use and development of different resistance screening methods, the elucidation of host genetics, as well as the use of histological and microscopic methods to study early resistance responses, broaden our knowledge and understanding of stem-rust resistance in South African wheat and triticale cultivars.

Ultimately, rust researchers, grain producers, and also the general public – through access to their daily bread – will benefit from her study.

News Archive

Young researchers are equipped to participate in projects relevant in global context
2017-09-05

 Description: Wheat genomics Tags: bioinformatics, Dr Renée Prins, Department of Plant Sciences, DNA and RNA, data sets 

This group of early career researchers received bioinformatics
training in Worcester in the UK from Dr Diane Saunders of the
John Innes Centre in the UK.
Photo: Supplied

The interdisciplinary field that develops methods and software tools to understand biological data is known as bioinformatics. According to Dr Renée Prins, a research fellow in the Department of Plant Sciences at the University of the Free State, there are few tertiary institutions in South Africa that offer a postgraduate degree in Bioinformatics.

“Most institutions focus either on humans, human diseases, forest trees and their pathogens.  They usually do not have spare capacity to assist researchers, for instance, those working on crops in the agricultural sector,” Dr Prins said.

Big data sets need significant skills

With the advancements made in genomics such as high throughput DNA marker platforms and next-generation sequencing technologies, the data sets biologists have to deal with have grown massively big and cannot be dealt with unless you have significant computer skills.

Dr Prins believes that all young researchers need some level of training in this field to be effective in future. The British Council Researcher Links, being run by the Newton Fund, gives early career researchers across selected partner countries the opportunity to form international connections through fully funded workshops and travel grants. Dr Prins made use of this opportunity and with the assistance of the Department of Research Development at the UFS, she arranged for Dr Diane Saunders of the John Innes Centre in the UK, a bioinformatician of note, to present training to a group of 20 early career researchers in Worcester in the UK.

Providing training with Dr Saunders were two other bioinformaticians from the UK, Dr Burkhard Steuernagel (John Innes Centre) and Dr Robert Davey (Earlham Institute). From the UFS side, Eleanor van der Westhuizen and Dr Henriëtte van den Berg (former UFS academic) acted as mentors, providing guidance on funding opportunities and career development skills.

Participating in projects in a global context
The researchers attending the training came from research institutions or academia, and they work involving plants (predominantly wheat) or plant pathogens. A limited number of participants from the commercial sector, including private South African companies focusing on plant breeding and molecular genetics lab work on agriculturally important crops also benefited from the training. 

“Tertiary institutions in South Africa have the obligation to ensure that young scientists are equipped with bioinformatics skills. If they are not equipped with the necessary skills, they will not be able to participate in research projects that are relevant in a global context,” said Dr Prins. 

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