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Dr Eelco Lukas, a geohydrologist, is the Director of the Institute for Groundwater Studies at the University of the Free State (UFS).

Nearly two-thirds of South Africa depends solely or partially on groundwater for domestic needs, and in a water-stressed country this source is becoming increasingly important. But we need to use it wisely.

Dr Eelco Lukas, a geohydrologist, is the Director of the Institute for Groundwater Studies at the University of the Free State (UFS). He explains that all the natural water found in the earth’s subsurface is called groundwater. “When we look hard enough, we can find groundwater almost everywhere.  But that does not mean that we can start pumping groundwater at any location.  In many places, the amount of groundwater available (yield) is so little, or the water so deep that it is not financially viable to pump it.  Another problem might be the quality of the water.”

Numerous towns and communities depend solely on groundwater and many towns use a combined supply of surface and groundwater. When the town or settlement is far from any surface water and groundwater is available, boreholes are drilled. Depending on the size of the settlement, the boreholes are equipped with electrical or hand pumps.

Most of the big cities use surface water in their water pipes. Almost all big cities worldwide are located close to a supply of freshwater.  Cape Town has drilled many boreholes in the past two years to augment the city’s water supply.  However, problems can arise when a borehole is drilled for a community with a certain number of people, and soon there are more people than the borehole can supply for. It is not so much a case of the ‘borehole drying up’ but that the capacity has been exceeded.

Misconceptions about groundwater

With increasing drought and water restrictions being imposed, many people opted for their own borehole. When so many people draw water from the same source, the water table will drop. It can be compared to drinking a milkshake, but when five other people also drink with straws from the same milkshake, all will be left thirsty. 

Dr Lukas says because groundwater is something that cannot be seen with the naked eye, the general public has many misconceptions about groundwater. Some people think that you can drill a hole just anywhere and that you will find water, while others believe that water flows in underground rivers. It generally moves very slowly, only a few metres per year. And if it rains in a specific place, it does not mean that water will reach a particular borehole.

“Sustainable groundwater usage is the certainty that enough groundwater is available in years to come.  Sustainability is dependent on two external factors, namely demand and supply.  Unfortunately, both these factors are beyond the control of the geohydrologist.  When enough water is available for a community, the chances are that the community starts to grow, thereby enlarging the demand.  If the higher demand cannot be met, sustainability is no longer possible. When a change in rainfall pattern results in a decline of the precipitation, the groundwater recharge will become less, resulting in a lower supply of water.”


How does water move?

Groundwater moves through openings in the subsurface. These openings can be large (a millimetre to a few centimetres), but most of the time they are small, only a fraction of a millimetre. These are called pore spaces.  Water can only move through the pores if the pores are connected to other pores. The ease with which water can move through the rock is called hydraulic conductivity and is expressed in volume per area per time.  

Dr Lukas explains that different types of rock have different sizes of pore openings. The speed at which water can move through unconsolidated materials ranges from 1 000 m/d (gravel) to 10-8 m/d (clay). Consolidated materials range from 1 000 m/d (highly fractured rock) to 10-7 m/d (shale).  Sandstone, a rock that occurs in abundance in South Africa, has a typical hydraulic conductivity of 10-2 m/d, meaning that the speed at which the water flows is around 1 cm/d, which is less than 4 metres per year.  

In a way, you can compare groundwater flow to a pipe filled with marbles.  If you remove one marble at the one side, a marble may enter the pipe on the other side.  Although it may take the marble a long time to reach the other side of the pipe, the movement of the marbles is noticed almost immediately, says Dr Lukas.

Before groundwater is used, experts must make sure that it is suitable, Dr Lukas says. This is one of the areas that the Institute of Groundwater Studies at the UFS excels in. The institute also provides a complete service to industries through field investigations, the development of specialised field equipment, a well-equipped commercial and water research laboratory, and a number of computer models for the management of the aquifers, protecting them from pollution.

There are different standards for different purposes.  The best-known standard is the drinking 
water standard (SANS 241).  The water is tested for microbiology, as well as for the physical, aesthetic, operational and chemical determinants, and for the taste and colour.

There are several geophysical methods to locate groundwater.  “It must be stressed that the geophysical methods do not actually indicate places with water, but rather places where the geology and geological features support the presence of groundwater,” he says.

Different techniques are used to ‘look’ at different depths.   Water found close to the surface (upper 20 m) is often young water, meaning that it has been recharged not too long ago.  Because it is so close to the surface, it is vulnerable to contamination.   Deeper water is probably a bit older and because it is farther below the surface, it is more protected against surface contamination and the quality of this water is generally good.  Really deep groundwater (> 200 metres deep) will be even older and may have elevated salt content due to the long residence time of the water.

How much groundwater do we have?

Groundwater is a significant source of water, and in some parts of the country the only source of potable water.  According to the Department of Water Affairs and Sanitation, the most recent estimate of sustainable potential yield of groundwater resources at high assurance is 7 500 million m³/a, while current groundwater use is estimated at around 2 000 million m³/a. Allowing for an underestimation on groundwater use, about 3 500 million m³/a could be available for further development.  Unfortunately, if there is a shortage of water on one side of the country, it cannot be supplemented with water from the other side.
 
With a drought, the amount of water falling from the sky is below average, which means that the available water to recharge is also less. With less recharge water, the groundwater levels will decline.  To make things worse during a drought, groundwater users will pump more water to make up the deficit in rainfall, thereby accelerating the drop in water levels.

“Groundwater can be used to help humanity. The pore space in aquifers can be used to store water during a wet period, to be used later during a drought. This is called water banking, where water is injected into the aquifers (artificial recharge) during a period when there is enough water and pumped from the same aquifer during a period of water shortage,” says Dr Lukas. 

News Archive

UFS study on cell development in top international science journal
2008-09-16

A study from the University of the Free State (UFS) on how the change in the packaging of DNA with cell development influenced the expression of genes, will be published in this week’s early edition of the prestigious international, peer-reviewed science journal, the Proceeding of the National Academy of Sciences of the USA (PNAS).

The PNAS journal has an impact factor of 10, which means that studies published in the journal are, on average, referred to by ten other scientific studies in a two year period. The South African Journal of Science, by comparison, has an impact factor of 0.7.

The UFS study, funded by the Wellcome Trust and the National Research Foundation (NRF), looked at how the change in the packaging of DNA with cell development influenced the expression of genes. It is very relevant to research on stem cells, an area of medicine that studies the possible use of undifferentiated cells to replace damaged tissue.

Prof. Hugh Patterton, of the Department of Microbial, Biochemical and Food Biotechnology at the UFS, who led the study, said: "We are extremely proud of this study. It was conceived in South Africa, it was performed in South Africa, the data were analysed in South Africa, and it was published from South Africa."

When a gene is expressed, the information encoded in the gene is used to manufacture a specific protein. In eukaryotes, which include humans, there is approximately 1m of DNA, containing the genes, in every cell. This length of DNA has to fit into a cell nucleus with a diameter of only about 10 micrometer. In order to fit the DNA into such a small volume, eukaryotic cells wrap their DNA onto successive protein balls, termed nucleosomes. Strings of nucleosomes, resembling a bead of pearls, is folded into a helix to form a chromatin fiber. The study from the UFS investigated how the binding of a specific protein, termed a linker histone, that binds to the length of DNA between nucleosomes, influenced the formation of the chromatin fiber and also the activity of genes.

"We found that the linker histone bound to chromatin in yeast, which we use as a model eukaryote, under conditions where virtually all the genes in the organism were inactive. It was widely believed that the binding of the linker histone caused the inactivation of genes. We studied the relationship between the amount of linker histone bound in the vicinity of each gene and the expression of that gene for all the genes in yeast, using genomic techniques. We made the surprising discovery that even through the linker histone preferentially bound to genes under conditions where the genes were shut off, this inactivation of genes was not caused by the binding of the linker histone and folding of the chromatin,” said Prof. Patterton.

He said: “Instead our data strongly suggested that the observed anti-correlation was due to the movement of enzymes along the DNA molecule, involved in processing the information in genes for the eventual manufacture of proteins. This movement of enzymes displaced the linker histones from the DNA. This finding now requires a rethink on aspects of how packaging of DNA influences gene activity."

Prof. Patterton said that his research group, using the Facility for Genomics and Proteomics as well as the Bioinformatics Node at the UFS, was currently busy with follow-up studies to understand how other proteins in nucleosomes affected the activities of genes, as well as with projects to understand how chemicals found in red wine and in green tea extended lifespan. "We are certainly having a marvelous time trying to understand the fundamental mechanisms of life, and the UFS is an exciting place to be if one was interested in studying life at the level of molecules," he said.


Media Release
Issued by: Lacea Loader
Assistant Director: Media Liaison
Tel: 051 401 2584
Cell: 083 645 2454
E-mail: loaderl.stg@ufs.ac.za  
18 September 2008
 

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