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Dr Eelco Lukas, a geohydrologist, is the Director of the Institute for Groundwater Studies at the University of the Free State (UFS).

Nearly two-thirds of South Africa depends solely or partially on groundwater for domestic needs, and in a water-stressed country this source is becoming increasingly important. But we need to use it wisely.

Dr Eelco Lukas, a geohydrologist, is the Director of the Institute for Groundwater Studies at the University of the Free State (UFS). He explains that all the natural water found in the earth’s subsurface is called groundwater. “When we look hard enough, we can find groundwater almost everywhere.  But that does not mean that we can start pumping groundwater at any location.  In many places, the amount of groundwater available (yield) is so little, or the water so deep that it is not financially viable to pump it.  Another problem might be the quality of the water.”

Numerous towns and communities depend solely on groundwater and many towns use a combined supply of surface and groundwater. When the town or settlement is far from any surface water and groundwater is available, boreholes are drilled. Depending on the size of the settlement, the boreholes are equipped with electrical or hand pumps.

Most of the big cities use surface water in their water pipes. Almost all big cities worldwide are located close to a supply of freshwater.  Cape Town has drilled many boreholes in the past two years to augment the city’s water supply.  However, problems can arise when a borehole is drilled for a community with a certain number of people, and soon there are more people than the borehole can supply for. It is not so much a case of the ‘borehole drying up’ but that the capacity has been exceeded.

Misconceptions about groundwater

With increasing drought and water restrictions being imposed, many people opted for their own borehole. When so many people draw water from the same source, the water table will drop. It can be compared to drinking a milkshake, but when five other people also drink with straws from the same milkshake, all will be left thirsty. 

Dr Lukas says because groundwater is something that cannot be seen with the naked eye, the general public has many misconceptions about groundwater. Some people think that you can drill a hole just anywhere and that you will find water, while others believe that water flows in underground rivers. It generally moves very slowly, only a few metres per year. And if it rains in a specific place, it does not mean that water will reach a particular borehole.

“Sustainable groundwater usage is the certainty that enough groundwater is available in years to come.  Sustainability is dependent on two external factors, namely demand and supply.  Unfortunately, both these factors are beyond the control of the geohydrologist.  When enough water is available for a community, the chances are that the community starts to grow, thereby enlarging the demand.  If the higher demand cannot be met, sustainability is no longer possible. When a change in rainfall pattern results in a decline of the precipitation, the groundwater recharge will become less, resulting in a lower supply of water.”


How does water move?

Groundwater moves through openings in the subsurface. These openings can be large (a millimetre to a few centimetres), but most of the time they are small, only a fraction of a millimetre. These are called pore spaces.  Water can only move through the pores if the pores are connected to other pores. The ease with which water can move through the rock is called hydraulic conductivity and is expressed in volume per area per time.  

Dr Lukas explains that different types of rock have different sizes of pore openings. The speed at which water can move through unconsolidated materials ranges from 1 000 m/d (gravel) to 10-8 m/d (clay). Consolidated materials range from 1 000 m/d (highly fractured rock) to 10-7 m/d (shale).  Sandstone, a rock that occurs in abundance in South Africa, has a typical hydraulic conductivity of 10-2 m/d, meaning that the speed at which the water flows is around 1 cm/d, which is less than 4 metres per year.  

In a way, you can compare groundwater flow to a pipe filled with marbles.  If you remove one marble at the one side, a marble may enter the pipe on the other side.  Although it may take the marble a long time to reach the other side of the pipe, the movement of the marbles is noticed almost immediately, says Dr Lukas.

Before groundwater is used, experts must make sure that it is suitable, Dr Lukas says. This is one of the areas that the Institute of Groundwater Studies at the UFS excels in. The institute also provides a complete service to industries through field investigations, the development of specialised field equipment, a well-equipped commercial and water research laboratory, and a number of computer models for the management of the aquifers, protecting them from pollution.

There are different standards for different purposes.  The best-known standard is the drinking 
water standard (SANS 241).  The water is tested for microbiology, as well as for the physical, aesthetic, operational and chemical determinants, and for the taste and colour.

There are several geophysical methods to locate groundwater.  “It must be stressed that the geophysical methods do not actually indicate places with water, but rather places where the geology and geological features support the presence of groundwater,” he says.

Different techniques are used to ‘look’ at different depths.   Water found close to the surface (upper 20 m) is often young water, meaning that it has been recharged not too long ago.  Because it is so close to the surface, it is vulnerable to contamination.   Deeper water is probably a bit older and because it is farther below the surface, it is more protected against surface contamination and the quality of this water is generally good.  Really deep groundwater (> 200 metres deep) will be even older and may have elevated salt content due to the long residence time of the water.

How much groundwater do we have?

Groundwater is a significant source of water, and in some parts of the country the only source of potable water.  According to the Department of Water Affairs and Sanitation, the most recent estimate of sustainable potential yield of groundwater resources at high assurance is 7 500 million m³/a, while current groundwater use is estimated at around 2 000 million m³/a. Allowing for an underestimation on groundwater use, about 3 500 million m³/a could be available for further development.  Unfortunately, if there is a shortage of water on one side of the country, it cannot be supplemented with water from the other side.
 
With a drought, the amount of water falling from the sky is below average, which means that the available water to recharge is also less. With less recharge water, the groundwater levels will decline.  To make things worse during a drought, groundwater users will pump more water to make up the deficit in rainfall, thereby accelerating the drop in water levels.

“Groundwater can be used to help humanity. The pore space in aquifers can be used to store water during a wet period, to be used later during a drought. This is called water banking, where water is injected into the aquifers (artificial recharge) during a period when there is enough water and pumped from the same aquifer during a period of water shortage,” says Dr Lukas. 

News Archive

Inaugural lecture: Prof Robert Bragg, Dept. of Microbial, Biochemical and Food Biotechnology
2006-05-17



Attending the inaugural lecture were in front from the left Prof Robert Bragg (lecturer at the Department of Microbial, Biochemical and Food Biotechnology) and Frederick Fourie (Rector and Vice-Chancellor).  At the back from the left were Prof James du Preez (Departmental Chairperson:  Department of Microbial, Biochemical and Food Biotechnology) and Prof Herman van Schalkwyk (Dean: Faculty of Natural and Agricultural Sciences). Photo: Stephen Collett
 

A summary of an inaugural lecture delivered by Prof Robert Bragg at the University of the Free State:

CONTROL OF INFECTIOUS AVIAN DISEASES – LESSONS FOR MAN?

Prof Robert R Bragg
Department of Microbial, Biochemical and Food Biotechnology
University of the Free State

“Many of the lessons learnt in disease control in poultry will have application on human medicine,” said Prof Robert Bragg, lecturer at the University of the Free State’s (UFS) Department of Microbial, Biochemical and Food Biotechnology during his inaugural lecture.

Prof Bragg said the development of vaccines remains the main stay of disease control in humans as well as in avian species.  Disease control can not rely on vaccination alone and other disease-control options must be examined.  

“With the increasing problems of antibiotic resistance, the use of disinfection and bio security are becoming more important,” he said.

“Avian influenza (AI) is an example of a disease which can spread from birds to humans.  Hopefully this virus will not develop human to human transmission,” said Prof Bragg.

According to Prof Bragg, South Africa is not on the migration route of water birds, which are the main transmitters of AI.  “This makes South Africa one of the countries less likely to get the disease,” he said.

If the AI virus does develop human to human transmission, it could make the 1918 flu pandemic pale into insignificance.  During the 1918 flu pandemic, the virus had a mortality rate of only 3%, yet more than 50 million people died.

Although the AI virus has not developed human-to-human transmission, all human cases have been related to direct contact with infected birds. The mortality rate in humans who have contracted this virus is 67%.

“Apart from the obvious fears for the human population, this virus is a very serious poultry pathogen and can cause 100% mortality in poultry populations.  Poultry meat and egg production is the staple protein source in most countries around the world. The virus is currently devastating the poultry industry world-wide,” said Prof Bragg.

Prof Bragg’s research activities on avian diseases started off with the investigation of diseases in poultry.  “The average life cycle of a broiler chicken is 42 days.  After this short time, they are slaughtered.  As a result of the short generation time in poultry, one can observe changes in microbial populations as a result of the use of vaccines, antibiotics and disinfectants,” said Prof Bragg.   

“Much of my research effort has been directed towards the control of infectious coryza in layers, which is caused by the bacterium Avibacterium paragallinarum.  This disease is a type of sinusitis in the layer chickens and can cause a drop in egg product of up to 40%,” said Prof Bragg.

The vaccines used around the world in an attempt to control this disease are all inactivated vaccines. One of the most important points is the selection of the correct strains of the bacterium to use in the vaccine.

Prof Bragg established that in South Africa, there are four different serovars of the bacterium and one of these, the serovar C-3 strain, was believed to be unique to Southern Africa. He also recently discovered this serovar for the first time in Israel, thus indicating that this serovar might have a wider distribution than originally believed.

Vaccines used in this country did not contain this serovar.  Prof Bragg established that the long term use of vaccines not containing the local South African strain resulted in a shift in the population distribution of the pathogen.

Prof Bragg’s research activities also include disease control in parrots and pigeons.   “One of the main research projects in my group is on the disease in parrots caused by the circovirus Beak and Feather Disease virus. This virus causes serious problems in the parrot breeding industry in this country. This virus is also threatening the highly endangered and endemic Cape Parrot,” said Prof Bragg.

Prof Bragg’s research group is currently working on the development of a DNA vaccine which will assist in the control of the disease, not only in the parrot breeding industry, but also to help the highly endangered Cape Parrot in its battle for survival.

“Not all of our research efforts are directed towards infectious coryza or the Beak and Feather Disease virus.  One of my Masters students is currently investigating the cell receptors involved in the binding of Newcastle Disease virus to cancerous cells and normal cells of humans. This work will also eventually lead to a possible treatment of cancer in humans and will assist with the development of a recombinant vaccine for Newcastle disease virus,” said Prof Bragg.

We are also currently investigating an “unknown” virus which causes disease problems in poultry in the Western Cape,” said Prof Bragg.
 
“Although disinfection has been extensively used in the poultry industry, it has only been done at the pre-placement stage. In other words, disinfectants are used before the birds are placed into the house. Once the birds are placed, all use of disinfectants stops,” said Prof Bragg.

“Disinfection and bio security can be seen as the ‘Cinderella’ of disease control in poultry.  This is also true for human medicine. One just has to look at the high numbers of people who die from hospital-acquired infections to realise that disinfection is not a concept which is really clear in human health care,” said Prof Bragg.

Much research has been done in the control of diseases through vaccination and through the use of antibiotics. “These pillars of disease control are, however, starting to crumble and more effort is needed on disinfection and bio security,” said Prof Bragg.

Prof Bragg has been working in close co-operation with a chemical manufacturing company in Stellenbosch to develop a unique disinfectant which his highly effective yet not toxic to the birds.

As a result of this unique product, he has developed the continual disinfection program for use in poultry. In this program the disinfectant is used throughout the production cycle of the birds. It is also used to ensure that there is excellent pre-placement disinfection.

“The program is extensively used for the control of infectious diseases in the parrot-breeding industry in South Africa and the product has been registered in 15 countries around the world with registration in the USA in the final process,” said Prof Bragg.

“Although the problem of plasmid mediated resistance to disinfectants is starting to rear its ugly head, this has allowed for the opening of a new research field which my group will hopefully exploit in the near future,” he said.

 

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