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05 April 2022 | Story Leonie Bolleurs | Photo Supplied
WJ swart
Prof Wijnand Swart believes a ‘systems level understanding’ of phytobiomes (consisting of plants, their environment, and all their associated organisms) will enable us to produce sufficient crops to meet global demands while minimising negative impacts on our environment.

Plant health is important for the survival of our planet and all its living creatures. Now, imagine an instrument that contains a DNA chip from virtually every known plant pathogen, where one can simply snip off a piece of the infected plant material, slip it into the ‘plant disease tricorder’, and within seconds you have not only a diagnosis of the disease, but all the information about its control too.

According to Prof Wijnand Swart, Professor of Plant Pathology in the Department of Plant Sciences at the University of the Free State (UFS) and President of the Southern African Society for Plant Pathology (SASPP), this concept might be a bit far-fetched, but is a distinct possibility for the not-too-distant future. “Without a doubt …,” he believes.

He was recently a guest on a series of radio talks on plant health in South Africa, hosted by the National Science and Technology Forum (NSTF) in partnership with Plaas/Farm TV (YouTube broadcaster). His talk on the topic, Whither (or wither) Plant Pathology in the next 50 years, was specifically focused on understanding the latest research and dynamics of the discipline in a South African context.

In terms of this futuristic perspective, he says collaboration between plant pathologists and biomedical and aeronautical engineers, nanotechnologists, and computer scientists will aid the development of micro-sensory technologies for the detection of new plant diseases that are relevant to biosecurity, plant disease diagnostics, and epidemiological modelling.

In his discussion, Prof Swart referred to the work of Prof John Lucas, former Head of Plant Pathology and Microbiology at the Rothamsted Research Station in the United Kingdom, who believes that there are three key issues facing plant pathologists in the 21st century. These are the strengthening of food security while simultaneously safeguarding the health of associated ecosystems and reducing the dependency on natural resources; the creation of pest and disease control systems that are sustainable and not compromised by the evolution of pest and pathogen strains; and the development of suitable crop protection technologies.

Future technologies

Based on the work of Prof Lucas, Prof Swart states that future technologies in plant health will develop in five areas. In the first area, he says DNA-based technologies will greatly increase the speed, sensitivity, and accuracy of pest and pathogen detection and diagnosis.

Also key here, is the integration of nanomaterials into disease management strategies and diagnostics. He says in the past decade, the use of nanotechnology in phytopathology has grown exponentially. According to him, nanotechnology can increase productivity using nano-pesticides and nano-fertilisers, improve soil quality by means of nano-zeolites and hydrogels, stimulate plant growth using nanomaterials, and provide smart monitoring via nano-sensors and wireless communication devices.

Prof Swart says according to Prof Lucas, the second area in which plant health technologies will grow is plant defence and immunity. When induced, plant resistance primes plants to deal with a diversity of biotic and abiotic stresses. Prospects of inducing chemically modulated plant resistance via biological agents (such as engineered microbes), might result in low-cost seed treatments, thereby removing the need for expensive chemical spray regimes.

Technology development in plant health will also become more evident in genetic diversification. Prof Swart believes sequencing the genomes of major crop species and their wild relatives will expand the known gene pool and diversify genetic resources available to plant breeders.

According to him, a new era is beckoning, where the prospect of crop pharmacology based on signal molecules and their receptors will become a reality. It will be based on the development of novel chemistries designed to manipulate specific molecular targets, by either regulating host resistance or disabling the disease-causing processes of pathogens.

The fifth area in which plant health technologies will develop, is ecological approaches to disease control. He says by understanding the ecology of pathogens, our ability to exploit their natural enemies will improve. Ecological approaches to plant disease control will have a significant impact on the introduction of invasive pathogen species, while the effect of climate change will influence the emergence of new plant diseases and epidemics. He strongly believes that it is important to take a holistic approach to understanding how and why plant pathogenesis occurs if we are to manage diseases effectively.

Future challenges

The development of these new technologies is very important, as there are several challenges that plant pathology will face in the future. These include the increasing demand for food to support the growing global population; the decreasing production potential of agriculture due to competition for fertile land; the increased risk of plant disease epidemics resulting from agricultural intensification; the depletion of natural resources; and the influence of climate change on interactions between plants and their pests or pathogens.

Prof Swart believes a ‘systems level understanding’ of phytobiomes (consisting of plants, their environment, and all their associated organisms) will enable us to produce sufficient crops to meet global demands while minimising negative impacts on our environment.

He concludes, saying that plant pathology will evolve as an interdisciplinary science. He adds that future research will focus on new problems that are traditionally seen as outside the core discipline of plant pathology. Furthermore, food security will be a dominant and important driver of plant pathology research, while the impact of climate change on plant diseases will be very significant. Finally, that the adaptive potential of plant and pathogen populations will be one of the most important predictors of the magnitude of climate change effects.

LISTEN: radio interview


News Archive

New world-class Chemistry facilities at UFS
2011-11-22

 

A world-class research centre was introduced on Friday 18 November 2011 when the new Chemistry building on the Bloemfontein Campus of the University of the Free State (UFS) was officially opened.
The upgrading of the building, which has taken place over a period of five years, is the UFS’s largest single financial investment in a long time. The building itself has been renovated at a cost of R60 million and, together with the new equipment acquired, the total investment exceeds R110 million. The university has provided the major part of this, with valuable contributions from Sasol and the South African Research Foundation (NRF), which each contributed more than R20 million for different facets and projects.
The senior management of Sasol, NECSA (The South African Nuclear Energy Corporation), PETLabs Pharmaceuticals, and visitors from Sweden attended the opening.

Prof. Andreas Roodt, Head of the Department of Chemistry, states the department’s specialist research areas includes X-ray crystallography, electrochemistry, synthesis of new molecules, the development of new methods to determine rare elements, water purification, as well as the measurement of energy and temperatures responsible for phase changes in molecules, the development of agents to detect cancer and other defects in the body, and many more.

“We have top expertise in various fields, with some of the best equipment and currently competing with the best laboratories in the world. We have collaborative agreements with more than twenty national and international chemistry research groups of note.

“Currently we are providing inputs about technical aspects of the acid mine water in Johannesburg and vicinity, as well as the fracking in the Karoo in order to release shale gas.”

New equipment installed during the upgrading action comprises:

  • X-ray diffractometers (R5 million) for crystal research. Crystals with unknown compounds are researched on an X-ray diffractometer, which determines the distances in angstroms (1 angstrom is a ten-billionth of a metre) and corners between atoms, as well as the arrangement of the atoms in the crystal, and the precise composition of the molecules in the crystal.
  • Differential scanning calorimeter (DSC) for thermographic analyses (R4 million). Heat transfer and the accompanying changes, as in volcanoes, and catalytic reactions for new motor petrol are researched. Temperature changes, coupled with the phase switchover of fluid crystals (liquid crystals -watches, TV screens) of solid matter to fluids, are measured.
  • Nuclear-magnetic resonance (NMR: Bruker 600 MHz; R12 million, one of the most advanced systems in Africa). A NMR apparatus is closely linked with the apparatus for magnetic resonance imaging, which is commonly used in hospitals. NMR is also used to determine the structure of unknown compounds, as well as the purity of the sample. Important structural characteristics of molecules can also be identified, which is extremely important if this molecule is to be used as medication, as well as to predict any possible side effects of it.
  • High-performance Computing Centre (HPC, R5 million). The UFS’ HPC consists of approximately 900 computer cores (equal to 900 ordinary personal computers) encapsulated in one compact system handling calculations at a billion-datapoint level It is used to calculate the geometry and spatial arrangements, energy and characteristics of molecules. The bigger the molecule that is worked with, the more powerful the computers must be doing the calculations. Computing chemistry is particularly useful to calculate molecular characteristics in the absence of X-ray crystallographic or other structural information. Some reactions are so quick that the intermediary products cannot be characterised and computing chemistry is of invaluable value in that case.
  • Catalytic and high-pressure equipment (R6 million; some of the most advanced equipment in the world). The pressures reached (in comparison with those in car tyres) are in gases (100 times bigger) and in fluids (1 500 times) in order to study very special reactions. The research is undertaken, some of which are in collaboration with Sasol, to develop new petrol and petrol additives and add value to local chemicals.
  • Reaction speed equipment (Kinetics: R5 million; some of the most advanced equipment in the world). The tempo and reactions can be studied in the ultraviolet, visible and infrared area at millisecond level; if combined with the NMR, up to a microsecond level (one millionth of a second.

Typical reactions are, for example, the human respiratory system, the absorption of agents in the brain, decomposition of nanomaterials and protein, acid and basis polymerisation reactions (shaping of water-bottle plastic) and many more.

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