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07 April 2022 | Story By Jóhann Thormählen | Photo ASEM Engage, Hannes Naude
Shimlas
The fullback Litha Nkula scored one of four tries for the Shimlas in wet conditions against the University of Pretoria.

They did have a more conservative plan in the soaking wet conditions, but it was the attacking style of the University of the Free State (UFS) Shimlas that shone through.

According to André Tredoux, the Shimlas Head Coach, his players followed their attacking instinct against the University of Pretoria (UP) on Monday to book a spot in the Varsity Cup semi-finals.

And that is also why the UFS is the team that scored the most tries in the tournament.

The team defeated UP 26-15 in trying conditions at Shimla Park and will finish among the top four. This, even though the Shimlas are still playing the Madibaz (Nelson Mandela University) in Gqeberha in their last league encounter on Monday (11 April 2022).

The UFS is at the top of the log (32 points) and will play in its first semi-final since 2019.

Anxious moments

Many would say an expansive approach is risky when it rains, but the Shimlas proved them wrong this week.

“Our vision for the team is to play according to our DNA (attacking rugby),” says Tredoux.

He admits that the wet conditions made them tweak this a bit: “But we still encouraged the players to attack the space that our opponents gave us.”

“Our execution and intensity in the first 34 minutes were superb.”

Six minutes before half-time, his side was leading 19-3 against UP when the game was stopped due to impending lightning. It could have been a bad result if play had not continued, as 40 minutes was needed for a result.

“After the good start, we were quite anxious. We knew that we at least had to play until half-time to get a result.”

Outscoring opponents

It is their philosophy of playing without fear and scoring tries that has helped the Shimlas outscore other Varsity Cup teams.

The UFS scored 48 tries in eight rounds, with the University of Cape Town Ikeys second on 38 tries.

But the Kovsies are also solid on defence, as they have conceded only 21 tries. Only UP (20) conceded less.

There is, however, not too much talk in the Shimla camp about a semi-final yet.

“We are very happy with where we are on the log at the moment.

“We will continue working hard and playing good rugby. But we only focus on the next match,” says Tredoux.

News Archive

Newly operational sequencing unit in genomics at UFS
2016-09-09

Description: Next Generation Sequencing  Tags: Next Generation Sequencing

Dr Martin Nyaga and his research assistant,
Tshidiso Mogotsi in the Next Generation
Sequencing Laboratory.
Photo: Charl Devenish

The Next Generation Sequencing (NGS) unit at the UFS was established as an interdisciplinary facility under the Directorate for Research Development, Faculty of Health Sciences and Faculty of Natural and Agricultural Sciences.

The aim of the NGS facility is to aid internal and external investigators undertaking studies on Deoxyribonucleic acid (DNA) sequencing, assembly and bioinformatics approaches using the more advanced Illumina MiSeq NGS platform.

The NGS unit became operational in 2016 and is managed by Dr Martin Nyaga and administered through the office of the Dean, Faculty of Health Sciences, under the leadership of Prof Gert Van Zyl. Dr Nyaga has vast experience in microbial genomics, having done his PhD in Molecular Virology.

He has worked and collaborated with globally recognised centres of excellence in Prokaryotic and Eukaryotic genomics, namely the J. Craig Venter Institute and the Laboratory of Viral Metagenomics, Rega Institute, among others.

The unit has undertaken several projects and successfully generated data on bacterial, viral and human genomes. Currently, work is ongoing on bacterial and fungal metagenomics studies through 16S rRNA sequencing.

In addition, the unit is also working on plasmid/insert sequencing and whole genome sequencing of animal and human rotaviruses. The unit has capacity to undertake other kinds of panels like the HLA, Pan-cancer and Tumor 15 sequencing, among others.

Several investigators from the UFS including but not limited to Prof Felicity Burt, Prof Wijnand Swart, Dr Frans O’Neil, Dr Trudi O'Neill, Dr Charlotte Boucher, Dr Marieka Gryzenhout and Dr Kamaldeen Baba are actively in collaboration with the NGS unit.

The unit has also invested in other specialised equipment such as the M220 Focused-ultrasonicator (Covaris), 2100 Bioanalyzer system (Agilent) and the real-time PCR cycler, the Rotor-Gene Q (Qiagen), which both the UFS and external investigators can use for their research.

Investigators working on molecular and related studies are encouraged to engage with Dr Nyaga on how they would like to approach their genomics projects at the UFS NGS unit. 

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