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02 August 2022 | Story Leonie Bolleurs | Photo Leonie Bolleurs
Alistair Naidoo, second-year master’s student in Conservation Genetics and full-time technician in the Department of Genetics; Prof Paul Grobler, Head of the Department of Genetics; Prof Gordon Luikart; and Hannah Janse van Vuuren, third-year master’s student in Conservation Genetics.

It is an important and exciting time to be doing research in conservation genetics. This is according to Prof Gordon Luikart, Professor of Conservation Ecology and Genetics at the Flathead Lake Bio Station at the University of Montana in the United States. 

Prof Luikart, whose primary research focus is the application of genetics to the conservation of natural and managed populations, recently delivered a lecture, The Expanding Role of Genetics/omics in Wildlife Research and Conservation, on the Bloemfontein Campus of the University of the Free State (UFS). The lecture, hosted by the Department of Genetics, was attended by a group of students and lecturers in conservation and a number of related fields. 

He is one of the leading scientists in the field of conservation genetics, including integration of genomics in conservation projects. He is also co-author of the textbook Conservation and the Genomics of populations – the current prescribed textbook for GENE3744.

Species threatened with extinction

In 2008, the International Union for Conservation of Nature (IUCN) stated that approximately 10-20% of all vertebrate and plant species are threatened with extinction over the next few decades. In 1984, American biologist Edward O Wilson also said that it will take millions of years to correct the ongoing loss of genetics and species diversity caused by the destruction of natural habitats. “This is the folly our descendants are least likely to forgive us.”

Prof Luikart is of the opinion that genetics has enormous potential to help manage wildlife and prevent extirpation. “My research works to realise this potential and help wildlife managers conserve populations and ecosystems,” he says. 

Conservation managers and biologists have understood the risks of inbreeding for more than 100 years. In his lecture, one of the aspects of genetic conservation he focused on, was the negative effects of inbreeding and how this can be reversed using genetic rescue. 

With the genetic rescue study, they found that the gene flow into recently isolated populations can increase individual fitness and population growth. He proposed that conservation managers should consider genetic principles and rescue as practical and important tools. 

Prof Luikart also provided a list of information that can be retrieved from molecular genetic data to help conservation managers. This includes intel on census and effective population size, gene flow and dispersal, local adaptation and selection, forensics, genetic identification and law enforcement, and disease ecology and transmission. 

Non-invasive genetic monitoring

In terms of detecting gene flow, he focused on a study about non-invasive genetic monitoring that was conducted in the Yellowstone Park. Prof Luikart and a group of students collected the shed hair and faeces of the grizzly bear, obtained from trees and hair traps, which were used as a source of DNA. 

They established, for instance, that inbreeding depression is more common and stronger than previously thought in natural populations. Genetic monitoring, using non-invasive methods as described, has been found to be an effective tool that conservation managers should consider for detecting inbreeding and loss of genome-wide variation.

His research on the bighorn sheep, the alpine ibex, and the black bear informed most of the findings he discussed during his lecture.

News Archive

UFS mathematician rates as top reviewer
2017-09-27

Description: Abdon Atanaga Tags: pre-publication peer reviews, Prof Abdon Atangana, Institute for Groundwater Studies, Publons for Publons Peer Review Awards 

Prof Abdon Atangana is a professor at the
Institute for Groundwater Studies at the University
of the Free State.
Photo: Rulanzen Martin

South Africa was included in the top 30 countries in terms of researchers who added the most pre-publication peer reviews. 

Prof Abdon Atangana, a professor of Applied Mathematics at the Institute for Groundwater Studies at the University of the Free State (UFS), is included in the list of top reviewers from top countries, as determined by the number of verified pre-publication peer reviews added to Publons for Publons Peer Review Awards 2017.  

Producing the most verified peer reviews

He rated in the top 1% of reviewers (9th), in all fields, who performed the most verified pre-publication peer reviews at Publons for Publons Peer Review Awards 2017. In 2017 he also received the following awards:
- Top reviewers for UFS in the category Mathematics, rating in eighth place. In this category Stanford University rated second. Rating in ninth place is the University of Luxembourg.
- Top reviewers for Mathematics (rating 1st). In this category the Southern Illinois University and the Johns Hopkins University in the US rated in 27th and 25th place respectively. 
- Top reviewers for Engineering (rating 47th)

Prof Atangana’s research interests are methods and applications of partial and ordinary differential equations, fractional differential equations, perturbation methods, asymptotic methods, iterative methods, and groundwater modelling.

Passion for the development of science
Key to his success as peer reviewer is his passion for the development of science, his ability to write fair reports about a given manuscript, as well as his knowledge of what has been done and what the challenges are in a given field to be able to give a report that will help the advancement of science. 

“Due to the impact of my research papers in the field of mathematics and applied mathematics and also my international recognition in the field of applied mathematics, many editors in more than 100 journals of applied mathematics trust my opinion to assess whether a submitted paper in a given journal of mathematics and applied mathematics can be published or not,” said Prof Atangana.

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