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08 March 2022 | Story Andre Damons | Photo Sonia Small (Kaleidoscope Studios)
Prof Abdon Antangana
Prof Abdon Atangana, a Professor of Applied Mathematics in the Institute for Groundwater Studies at the University of the Free State (UFS) and South Africa’s top-ranked scientist in Mathematics, wants to prepare the next generation of African professors.

A new book written by Prof Abdon Atangana, Professor of Applied Mathematics at the Institute for Groundwater Studies at the University of the Free State (UFS), in collaboration with one of his students, on the flow of groundwater, suggests several new and modified models to better predict anomalous behaviours of the flow and the movement of pollution within complex geological formations.

Mathematical Analysis of Groundwater Flow Models is one of two books Prof Atangana published recently that he wrote with his students. The other, Fractional Stochastic Differential Equations: Applications to Covid-19 Modeling, provides a thorough conversation on the underpinnings of COVID-19 spread modelling. He wrote the book with a postdoctoral fellow, Dr Seda Araz Igret from SIIRT University, Turkey. Since 2016 he has published a total number of six books, some of which are still under evaluation by Springer and Elsevier.

Time to prepare next generation of African professors 

This highly cited researcher is excited about collaborating with his students on projects such as these as he feels it is time for him to prepare the way for the next generation of African professors. Prof Atangana is ranked at No 219 in the world rankings and No 1 in South Africa by Research.com, a leading academic platform for researchers. 

According to the platform, which recently released the 2022 Edition of its Ranking of Top 1000 Scientists in the field of Mathematics, the ranking is based on the H-index metric provided by Microsoft Academic and includes only leading scientists with an H-index of at least 30 for academic publications in the field of Mathematics.

“Both books are important for me because they are first-time published books with my own students. There is a time to prepare the way for yourself and a time to prepare ways for the next generation. It is time for me to prepare the way for the next generation of African professors. I wish that the next time this list (https://research.com/scientists-rankings/mathematics/za) [is released] many of my students [will] appear,” says Prof Atangana.

About his book with Dr Igret, he says it presents the dynamic of COVID-19 spread behaviour worldwide. It is noticed that the spread dynamic followed process with nonlocal behaviours, which resemble power law, fading memory, crossover, and stochastic behaviours. Fractional stochastic differential equations are therefore used to model spread behaviours in different parts of the world. 

“The content coverage includes a brief history of COVID-19 spread worldwide from December 2019 to September 2021, followed by statistical analysis of collected data for infected, death and recovery classes,” says Prof Atangana.

Mathematical analysis of Groundwater Flow Models serves as a valuable resource for graduate and PhD students as well as researchers working within the field of groundwater modelling, says Prof Atangana. It includes features such as:
• Modified numerical and analytical methods for solving new and modified models for groundwater flow and transport 
• New flow and transform models for groundwater transport in complex geological formations 
• Examination of fractal and crossover behaviours and their mathematical formulations

Top-ranking scientist 

Prof Atangana was also recently elected as a fellow of The World Academy of Sciences (TWAS) and received the World Academy of Sciences Award for Mathematics (TWAS -Mohammad A Hamdan, 2020) on 1 November 2021.

Very recently, he was also ranked No 1 in the world in Mathematics, No 186 in the world in all the fields, and No 1 in Africa in all the fields, according to the Stanford list of 2% single-year table.

He was also named among the top 1% of scientists on the global Clarivate Web of Science list. Fewer than 6 200 or 0.1% of the world’s researchers were included on this list in 2019, 2020 and 2021, with fewer than 10 of the scientists hailing from South Africa. 

“While my name is ranked No 1 in South Africa and No 219 in the world, this shows the impact of my research that has been done since 2013. It is worth noting that this ranking disadvantages younger researchers. For example, I got my first publication in 2013 but the researcher who was ranked No 1 started in 1972. To make the ranking fair, the total H-index should be divided by the number of years of publication. I am very proud to see that despite this disadvantage I am still topping in South Africa and am No 219 in the world.”

News Archive

Inaugural lecture: Prof Robert Bragg, Dept. of Microbial, Biochemical and Food Biotechnology
2006-05-17



Attending the inaugural lecture were in front from the left Prof Robert Bragg (lecturer at the Department of Microbial, Biochemical and Food Biotechnology) and Frederick Fourie (Rector and Vice-Chancellor).  At the back from the left were Prof James du Preez (Departmental Chairperson:  Department of Microbial, Biochemical and Food Biotechnology) and Prof Herman van Schalkwyk (Dean: Faculty of Natural and Agricultural Sciences). Photo: Stephen Collett
 

A summary of an inaugural lecture delivered by Prof Robert Bragg at the University of the Free State:

CONTROL OF INFECTIOUS AVIAN DISEASES – LESSONS FOR MAN?

Prof Robert R Bragg
Department of Microbial, Biochemical and Food Biotechnology
University of the Free State

“Many of the lessons learnt in disease control in poultry will have application on human medicine,” said Prof Robert Bragg, lecturer at the University of the Free State’s (UFS) Department of Microbial, Biochemical and Food Biotechnology during his inaugural lecture.

Prof Bragg said the development of vaccines remains the main stay of disease control in humans as well as in avian species.  Disease control can not rely on vaccination alone and other disease-control options must be examined.  

“With the increasing problems of antibiotic resistance, the use of disinfection and bio security are becoming more important,” he said.

“Avian influenza (AI) is an example of a disease which can spread from birds to humans.  Hopefully this virus will not develop human to human transmission,” said Prof Bragg.

According to Prof Bragg, South Africa is not on the migration route of water birds, which are the main transmitters of AI.  “This makes South Africa one of the countries less likely to get the disease,” he said.

If the AI virus does develop human to human transmission, it could make the 1918 flu pandemic pale into insignificance.  During the 1918 flu pandemic, the virus had a mortality rate of only 3%, yet more than 50 million people died.

Although the AI virus has not developed human-to-human transmission, all human cases have been related to direct contact with infected birds. The mortality rate in humans who have contracted this virus is 67%.

“Apart from the obvious fears for the human population, this virus is a very serious poultry pathogen and can cause 100% mortality in poultry populations.  Poultry meat and egg production is the staple protein source in most countries around the world. The virus is currently devastating the poultry industry world-wide,” said Prof Bragg.

Prof Bragg’s research activities on avian diseases started off with the investigation of diseases in poultry.  “The average life cycle of a broiler chicken is 42 days.  After this short time, they are slaughtered.  As a result of the short generation time in poultry, one can observe changes in microbial populations as a result of the use of vaccines, antibiotics and disinfectants,” said Prof Bragg.   

“Much of my research effort has been directed towards the control of infectious coryza in layers, which is caused by the bacterium Avibacterium paragallinarum.  This disease is a type of sinusitis in the layer chickens and can cause a drop in egg product of up to 40%,” said Prof Bragg.

The vaccines used around the world in an attempt to control this disease are all inactivated vaccines. One of the most important points is the selection of the correct strains of the bacterium to use in the vaccine.

Prof Bragg established that in South Africa, there are four different serovars of the bacterium and one of these, the serovar C-3 strain, was believed to be unique to Southern Africa. He also recently discovered this serovar for the first time in Israel, thus indicating that this serovar might have a wider distribution than originally believed.

Vaccines used in this country did not contain this serovar.  Prof Bragg established that the long term use of vaccines not containing the local South African strain resulted in a shift in the population distribution of the pathogen.

Prof Bragg’s research activities also include disease control in parrots and pigeons.   “One of the main research projects in my group is on the disease in parrots caused by the circovirus Beak and Feather Disease virus. This virus causes serious problems in the parrot breeding industry in this country. This virus is also threatening the highly endangered and endemic Cape Parrot,” said Prof Bragg.

Prof Bragg’s research group is currently working on the development of a DNA vaccine which will assist in the control of the disease, not only in the parrot breeding industry, but also to help the highly endangered Cape Parrot in its battle for survival.

“Not all of our research efforts are directed towards infectious coryza or the Beak and Feather Disease virus.  One of my Masters students is currently investigating the cell receptors involved in the binding of Newcastle Disease virus to cancerous cells and normal cells of humans. This work will also eventually lead to a possible treatment of cancer in humans and will assist with the development of a recombinant vaccine for Newcastle disease virus,” said Prof Bragg.

We are also currently investigating an “unknown” virus which causes disease problems in poultry in the Western Cape,” said Prof Bragg.
 
“Although disinfection has been extensively used in the poultry industry, it has only been done at the pre-placement stage. In other words, disinfectants are used before the birds are placed into the house. Once the birds are placed, all use of disinfectants stops,” said Prof Bragg.

“Disinfection and bio security can be seen as the ‘Cinderella’ of disease control in poultry.  This is also true for human medicine. One just has to look at the high numbers of people who die from hospital-acquired infections to realise that disinfection is not a concept which is really clear in human health care,” said Prof Bragg.

Much research has been done in the control of diseases through vaccination and through the use of antibiotics. “These pillars of disease control are, however, starting to crumble and more effort is needed on disinfection and bio security,” said Prof Bragg.

Prof Bragg has been working in close co-operation with a chemical manufacturing company in Stellenbosch to develop a unique disinfectant which his highly effective yet not toxic to the birds.

As a result of this unique product, he has developed the continual disinfection program for use in poultry. In this program the disinfectant is used throughout the production cycle of the birds. It is also used to ensure that there is excellent pre-placement disinfection.

“The program is extensively used for the control of infectious diseases in the parrot-breeding industry in South Africa and the product has been registered in 15 countries around the world with registration in the USA in the final process,” said Prof Bragg.

“Although the problem of plasmid mediated resistance to disinfectants is starting to rear its ugly head, this has allowed for the opening of a new research field which my group will hopefully exploit in the near future,” he said.

 

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