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05 September 2022 | Story Andrè Damons | Photo Andrè Damons
Prof Abdon Atangana
Prof Abdon Atangana, Professor of Applied Mathematics in the Institute for Groundwater Studies (IGS) and a highly cited mathematician for the years 2019-2021, says existing mathematical models are used to first fit collected data and then predict future events. It is for this reason he introduced a new concept that can be used to test whether the spread will have one or several waves.

With a new outbreak of the Ebola Virus Disease (EVD) reported this year in Democratic Republic of the Congo (DRC) – the 14th EVD outbreak in the country – researchers at the University of the Free State (UFS) introduced a new concept that can be used to test whether the spread will have one or several waves. They believe the focus should be to identify the source or the hosts of this virus for it to be a complete eradication. 

According to the Centers for Disease Control and Prevention (CDC), the Ministry of Health in the Democratic Republic of the Congo (DRC) declared an outbreak of Ebola in Mbandaka health zone, Equateur Province on April 23, 2022. EVD, formerly known as Ebola haemorrhagic fever, is a severe, often fatal illness affecting humans and other primates. The virus is transmitted to people from wild animals (such as fruit bats, porcupines and non-human primates) and then spreads in the human population through direct contact with the blood, secretions, organs or other bodily fluids of infected people, and with surfaces and materials (e.g. bedding, clothing) contaminated with these fluids, according to the World Health Organisation (WHO).
 
Prof Abdon Atangana, Professor of Applied Mathematics in the Institute for Groundwater Studies (IGS), says existing mathematical models are used to first fit collected data and then predict future events. Predictions help lawmakers to take decisions that will help protect their citizens and their environments. The outbreaks of COVID-19 and other infectious diseases have exposed the weakness of these models as they failed to predict the number of waves and in several instances; they failed to predict accurately day-to-day new infections, daily deaths and recoveries.

Solving the challenges of the current models

In the case of COVID-19 in South Africa, it is predicted that the country had far more infections than what was recorded, which is due to challenges faced by the medical facilities, poverty, inequality, and other factors. With Ebola in the DRC, data recorded are not far from reality due to the nature of the virus and its symptoms. However, the predictions show although some measures have been put in place in DRC and other places where the Ebola virus spread, they will still face some challenges in the future, as the virus will continue to spread but may have less impact. 

“To solve the challenges with the current models, we suggested a new methodology. We suggested that each class should be divided into two subclasses (Detected and undetected) and we also suggested that rates of infection, recovery, death and vaccination classes should be a function of time not constant as suggested previously. These rates are obtained from what we called daily indicator functions. For example, an infection rate should be obtained from recorded data with the addition of an uncertain function that represents non-recorded data (Here more work is still to be done to get a better approximation).

“I introduced a new concept called strength number that can be used to test whether the spread will have one or several waves. The strength number is an accelerative force that helps to provide speed changes, thus if this number is less than zero we have deceleration, meaning there will be a decline in the number of infections. If the number is positive, we have acceleration, meaning we will have an increase in numbers. If the number is zero, the current situation will remain the same,” according to Prof Atangana. 

To provide better prediction, he continues, reliable data are first fitted with the suggested mathematical model. This helps them to know if their mathematical model is replicating the dynamic process of the spread. The next step is to predict future events, to do this, we create three sub-daily indicator functions (minimum, actual, and maximum). These will lead to three systems, the first system represents the worst-case scenario, the second is the actual scenario, and the last is a best-case scenario.

Virus will continue to spread but with less impact

Using this method, Prof Atangana, a highly cited mathematician for the years 2019-2021, says he and Dr Seda Igret Araz, postdoctoral student, were able to predict that, although some measures have been put in place in DRC and other places where the Ebola virus spreads, they will still face some challenges in the future as the virus will continue to spread but may have less impact. 

To properly achieve the conversion from observed facts into mathematical formulations and to address these limitations, he had to ask fundamental questions such as what is the rate of infection, what is the strength of the infection, what are the crossover patterns presented by the spread, how can day-to-day new infected numbers be predicted and what differential operator should be used to model a dynamic process followed by the spread?

This approach was tested for several infectious diseases where we present the case of Ebola in Congo and Covid-19 in South Africa.  

News Archive

UFS academics nominated for NSTF Awards
2016-05-19

Description: Zakkie Pretorius Tags: Zakkie Pretorius

Prof Zakkie Pretorius

Prof Zakkie Pretorius and Prof Maryke Labuschagne, researchers in the Department of Plant Sciences at the University of the Free State (UFS), have been nominated for the 2016 awards of the National Science and Technology Forum (NSTF) in partnership with South32.

The NSTF awards recognise outstanding contributions to science, engineering, and technology (SET) and innovation for researchers and other SET-related professionals. The awards are referred to as the ‘Science Oscars’ of South Africa, as they are the largest, most comprehensive, and most sought-after national Awards of their kind. Among other things, the NSTF aims to celebrate, recognise, and reward excellence in science, engineering, technology and innovation within the SET sectors.

Prof Pretorius was short-listed as a finalist in the category: Lifetime Award for an outstanding contribution to SET and innovation by an individual over a period of 15 years or more.

Description: Maryke Labuschagne Tags: Maryke Labuschagne

Prof Maryke Labuschagne

He works on crop quality and disease resistance in the field crops research chair headed by Prof Labuschagne in the Department of Plant Sciences. Disease-resistance breeding is a continuation of the internationally-acclaimed wheat rust research that Prof Pretorius has been conducting during his career.

Prof Labuschagne is a finalist in the category: Special Award in Crop Science and Food Security. This is a special award by the NSTF this year, in honour of the 2016 International Year of Pulses, as declared by the United Nations.

Prof Labuschagne heads the research chair on quality and diseases in field crops at the UFS. Her research, and that of her students, focuses on the genetic improvement of food security crops in Africa, including such staples as maize and cassava.

At a Gala Dinner on 30 June 2016, the finalists will be honoured before the Minister of Science and Technology, the patron of the occasion, announces the winners of the 2015/2016 awards.   

 

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