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09 November 2023 | Story André Damons | Photo SUPPLIED
Prof Atangana
Prof Abdon Atangana, a professor of Applied Mathematics at the University of the Free State (UFS), is the highest-ranked UFS scientist included in Stanford University’s World’s Top 2% Scientists list.

A professor of Applied Mathematics at the University of the Free State (UFS) is again the highest-ranked scientist from the institution included in Stanford University’s annual ranking of the top 2% of scientists in the world. 

Prof Abdon Atangana from the UFS’s Institute for Groundwater is ranked number one in applied mathematics, mathematical physics, mathematics, and statistics in the world, and number 260 in all of science, technology, and engineering in the Stanford University World’s Top 2% Scientists list. He is also ranked highest (5 620) of all the UFS scientists included in the career-long data set. 

‘Africans in Africa can impact the world’

“The ranking provides us with the impact of our outputs, and it shows that Africans can contribute to the development of science, technology, engineering, and mathematics while still in Africa,” Prof Atangana said. “This also shows that Africans in Africa can have impact on the world. My motivation is to tell the next generation that Africans do not always need to graduate from the top universities of the global North to make a global impact.  

“We must work hard to make our African universities reach the same level of those from the global North, such that a student from the global North will wish to enroll in our universities. The development of our continent does not rest on sport, music, and so forth alone, but on science, technology, engineering, and mathematics. Having the best scientists, mathematicians, and engineers in the world in Africa should be the strive of all Africans.” 

Three of the UFS’s SARChI Research Chairs have also been included in this list: Prof Hendrik Swart, Chair: Solid-state Luminescent and Advanced Materials (Applied Physics, ranked 40 269 in the single-year dataset); Prof Melanie Walker, Chair: Higher Education and Human Development (ranked 68 337); and Prof Maryke Labuschagne, Chair: Disease Resistance and Quality in Field Crops (Plant Sciences, 165 780).  

Other UFS scientists included in the single-year data set are: Prof John M. Carranza (Geology, 4 837); Prof Muhammad Altaf Khan ( Applied Mathematics, 6 366); Prof Maxim Finkelstein (Statistics/ Mathematical Statistics, 63 394); Prof Marianne Reid (School of Nursing, 72 861); Prof John Owen (Centre for Development Support, 103 368); Prof Brownhilder Neneh (Department of Business Management, 73 635); Prof Jorma Hölsä (Research Fellow: Department of Physics, 88 833); Prof Johann Beukes (Philosophy & Classics, 6 547 764); Rian Venter, (829 709); Dr Yuri Marusik (Zoology and Entomology, 553 619); Prof Robert Schall (Department of Mathematical Statistics and Actuarial Science, 276 681); Prof Deborah Posel (Department of Sociology, 275 535); Dr Vijay Kumar (Physics, 274 541); Dr Abhay Prakash Mishra (Pharmacology, 229 625); Prof RE Kroon (Physics, 226 554); Dr Krishnan Anand (Chemical Pathology, 235 300); Prof Andrew Marston (Chemistry, 147 147); Dr Seda Igret Araz (Applied Mathematics,125 824); Prof Jeanet Conradie (Chemistry, 106 521); Prof Louis Scott (Plant Sciences, 73 874); Prof Johan Grobbelaar (Plant Sciences, 97 722); Prof David Motaung (Physics, 53 553); Dr Samuel Nambile Cumber (Health Systems Research and Development, 555 563). 

Career-long data set 

The Stanford University rankings also include a list of the top 2% of world-class researchers based on citations over their full careers. Scientists are classified into 22 scientific fields and 174 sub-fields. Field- and subfield-specific percentiles are also provided for all scientists with at least five published papers. Career-long data is updated to the end of 2021, and single recent-year data pertain to citations received during calendar year 2021. The selection is based on the top 100 000 scientists by C-score (with and without self-citations) or a percentile rank of 2% or above in the sub-field.

The career-long data set includes the names of:

Prof Carranza (17 466); Prof Scott (55 882); Prof Reid (57 173); Prof Hölsä (64 402); Prof Grobbelaar (71 094); Prof Walker (78 239); Prof Andrew Marston (Chemistry, 84 484); Prof Schall (90 268); HA Snyman (Animal, Wildlife and Grassland Sciences, 96 374); Prof Swart (103 895); Robert WM Frater Cardiovascular Research Centre (111 896); Prof Frederick Kruger (Centre for Environmental Management,117 971); Prof Finkelstein (124 118); Prof Johan Visser (Geology, 125 331); Prof James C du Preez (Biotechnology, 168 841); Prof Posel (172 295); Prof Conradie (178 157); Prof Michael D MacNeil (Dairy and Animal Science, 184 193); Prof Khan (201 101); Prof Owen (262 897). 

“The representation of our researchers from a variety of disciplinary domains in this prestigious ranking, is confirmation of their excellence, impact, and the global esteem they hold. UFS is proud to be a home to scholars in our midst who take us incrementally forward as an institution because of their cutting-edge research,” said Prof Vasu Reddy, UFS Deputy Vice-Chancellor: Research and Internationalisation. 

  • Prof Atangana has also been shortlisted as one of the finalists for the prestigious Alkebulan Immigrants Impact Awards (AIIA) 2023, in the South African Flag Carrier category. Voting started on 1 November, and the award ceremony is set to take place on 23 November in Johannesburg. 

News Archive

Inaugural lecture: Prof Robert Bragg, Dept. of Microbial, Biochemical and Food Biotechnology
2006-05-17



Attending the inaugural lecture were in front from the left Prof Robert Bragg (lecturer at the Department of Microbial, Biochemical and Food Biotechnology) and Frederick Fourie (Rector and Vice-Chancellor).  At the back from the left were Prof James du Preez (Departmental Chairperson:  Department of Microbial, Biochemical and Food Biotechnology) and Prof Herman van Schalkwyk (Dean: Faculty of Natural and Agricultural Sciences). Photo: Stephen Collett
 

A summary of an inaugural lecture delivered by Prof Robert Bragg at the University of the Free State:

CONTROL OF INFECTIOUS AVIAN DISEASES – LESSONS FOR MAN?

Prof Robert R Bragg
Department of Microbial, Biochemical and Food Biotechnology
University of the Free State

“Many of the lessons learnt in disease control in poultry will have application on human medicine,” said Prof Robert Bragg, lecturer at the University of the Free State’s (UFS) Department of Microbial, Biochemical and Food Biotechnology during his inaugural lecture.

Prof Bragg said the development of vaccines remains the main stay of disease control in humans as well as in avian species.  Disease control can not rely on vaccination alone and other disease-control options must be examined.  

“With the increasing problems of antibiotic resistance, the use of disinfection and bio security are becoming more important,” he said.

“Avian influenza (AI) is an example of a disease which can spread from birds to humans.  Hopefully this virus will not develop human to human transmission,” said Prof Bragg.

According to Prof Bragg, South Africa is not on the migration route of water birds, which are the main transmitters of AI.  “This makes South Africa one of the countries less likely to get the disease,” he said.

If the AI virus does develop human to human transmission, it could make the 1918 flu pandemic pale into insignificance.  During the 1918 flu pandemic, the virus had a mortality rate of only 3%, yet more than 50 million people died.

Although the AI virus has not developed human-to-human transmission, all human cases have been related to direct contact with infected birds. The mortality rate in humans who have contracted this virus is 67%.

“Apart from the obvious fears for the human population, this virus is a very serious poultry pathogen and can cause 100% mortality in poultry populations.  Poultry meat and egg production is the staple protein source in most countries around the world. The virus is currently devastating the poultry industry world-wide,” said Prof Bragg.

Prof Bragg’s research activities on avian diseases started off with the investigation of diseases in poultry.  “The average life cycle of a broiler chicken is 42 days.  After this short time, they are slaughtered.  As a result of the short generation time in poultry, one can observe changes in microbial populations as a result of the use of vaccines, antibiotics and disinfectants,” said Prof Bragg.   

“Much of my research effort has been directed towards the control of infectious coryza in layers, which is caused by the bacterium Avibacterium paragallinarum.  This disease is a type of sinusitis in the layer chickens and can cause a drop in egg product of up to 40%,” said Prof Bragg.

The vaccines used around the world in an attempt to control this disease are all inactivated vaccines. One of the most important points is the selection of the correct strains of the bacterium to use in the vaccine.

Prof Bragg established that in South Africa, there are four different serovars of the bacterium and one of these, the serovar C-3 strain, was believed to be unique to Southern Africa. He also recently discovered this serovar for the first time in Israel, thus indicating that this serovar might have a wider distribution than originally believed.

Vaccines used in this country did not contain this serovar.  Prof Bragg established that the long term use of vaccines not containing the local South African strain resulted in a shift in the population distribution of the pathogen.

Prof Bragg’s research activities also include disease control in parrots and pigeons.   “One of the main research projects in my group is on the disease in parrots caused by the circovirus Beak and Feather Disease virus. This virus causes serious problems in the parrot breeding industry in this country. This virus is also threatening the highly endangered and endemic Cape Parrot,” said Prof Bragg.

Prof Bragg’s research group is currently working on the development of a DNA vaccine which will assist in the control of the disease, not only in the parrot breeding industry, but also to help the highly endangered Cape Parrot in its battle for survival.

“Not all of our research efforts are directed towards infectious coryza or the Beak and Feather Disease virus.  One of my Masters students is currently investigating the cell receptors involved in the binding of Newcastle Disease virus to cancerous cells and normal cells of humans. This work will also eventually lead to a possible treatment of cancer in humans and will assist with the development of a recombinant vaccine for Newcastle disease virus,” said Prof Bragg.

We are also currently investigating an “unknown” virus which causes disease problems in poultry in the Western Cape,” said Prof Bragg.
 
“Although disinfection has been extensively used in the poultry industry, it has only been done at the pre-placement stage. In other words, disinfectants are used before the birds are placed into the house. Once the birds are placed, all use of disinfectants stops,” said Prof Bragg.

“Disinfection and bio security can be seen as the ‘Cinderella’ of disease control in poultry.  This is also true for human medicine. One just has to look at the high numbers of people who die from hospital-acquired infections to realise that disinfection is not a concept which is really clear in human health care,” said Prof Bragg.

Much research has been done in the control of diseases through vaccination and through the use of antibiotics. “These pillars of disease control are, however, starting to crumble and more effort is needed on disinfection and bio security,” said Prof Bragg.

Prof Bragg has been working in close co-operation with a chemical manufacturing company in Stellenbosch to develop a unique disinfectant which his highly effective yet not toxic to the birds.

As a result of this unique product, he has developed the continual disinfection program for use in poultry. In this program the disinfectant is used throughout the production cycle of the birds. It is also used to ensure that there is excellent pre-placement disinfection.

“The program is extensively used for the control of infectious diseases in the parrot-breeding industry in South Africa and the product has been registered in 15 countries around the world with registration in the USA in the final process,” said Prof Bragg.

“Although the problem of plasmid mediated resistance to disinfectants is starting to rear its ugly head, this has allowed for the opening of a new research field which my group will hopefully exploit in the near future,” he said.

 

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