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29 January 2020 | Story Leonie Bolleurs | Photo Dr Marieka Gryzenhout and Gary Goldman.
Mushroom
Scutellinia scutellate, commonly known as eyelash cup, molly eye-winker, scarlet elf cap, or eyelash fungus, grows gregariously, or in clusters, and sometimes in dense swarms on moist hardwood logs, sometimes near water or marshy places.

Citizen scientists and nature lovers who are serious and enthusiastic about fungi, can now sit back and relax with a copy of the recently published nature guide titled FField guide to mushrooms & other fungi of South Africa (Penguin Random House Struik, Cape Town).

Dr Marieka Gryzenhout, a C-rated scientist and Senior Lecturer in the Department of Genetics at the University of the Free State (UFS), co-authored the book with Gary Goldman, amateur mycologist from Cape Town.

The book contains descriptions of 200 species and extensive background information and tips on fungi.

‘They are all beautiful to me’

Dr Gryzenhout says fungi are her passion, both small and large. “Interest in mushrooms is currently booming in South Africa, and there was thus a great need to bring out a book with more species than my previous book, Pocket Guide to Mushrooms of South Africa, published in 2010.”

The latter is the first book that Dr Gryzenhout published on South African mushrooms. The book is still available in stores and she is currently revising it.

She does not have a favourite mushroom or fungus, “because they are all beautiful to me”, she states. In the book she published with Goldman, they cover, among others, general information on what fungi are – since very few people know about them. The book also serves as an identification guide, with a range of photographs for each species to make identification easier. 

Goldman furthermore added his flair and expertise, with general information on how to forage for mushrooms (hunting for mushrooms) for the dinner table, together with some tasty recipes.

“Citizen scientists are mostly interested in the edible fungi and mushrooms. However, they are beautiful and conspicuous, and it is gratifying to find them and actually being able to identify this rather ill-studied group,” adds Dr Gryzenhout.

Contributions of citizen scientists helpful

She says, in general, people were overjoyed that another guide on mushrooms was finally published. Dr Gryzenhout continues: “The excellent range of photographs, contributed by a variety of citizen scientists, were stunning and helpful.  In the time when the book came out, no less than seven mushroom-related societies were brought to life by citizens due to the rapidly growing interest in fungi and the need for information. A follow-up to the book is already needed!”

She says the book is bought as gifts and prizes in these societies, “which we are really humbled about. Since the book contains a number of first reports for South Africa as well as a range of edible and poisonous fungi, it is also important for biodiversity and human health.”

More than 1 500 copies of the book have already been sold since is appearance.

News Archive

Newly operational sequencing unit in genomics at UFS
2016-09-09

Description: Next Generation Sequencing  Tags: Next Generation Sequencing

Dr Martin Nyaga and his research assistant,
Tshidiso Mogotsi in the Next Generation
Sequencing Laboratory.
Photo: Charl Devenish

The Next Generation Sequencing (NGS) unit at the UFS was established as an interdisciplinary facility under the Directorate for Research Development, Faculty of Health Sciences and Faculty of Natural and Agricultural Sciences.

The aim of the NGS facility is to aid internal and external investigators undertaking studies on Deoxyribonucleic acid (DNA) sequencing, assembly and bioinformatics approaches using the more advanced Illumina MiSeq NGS platform.

The NGS unit became operational in 2016 and is managed by Dr Martin Nyaga and administered through the office of the Dean, Faculty of Health Sciences, under the leadership of Prof Gert Van Zyl. Dr Nyaga has vast experience in microbial genomics, having done his PhD in Molecular Virology.

He has worked and collaborated with globally recognised centres of excellence in Prokaryotic and Eukaryotic genomics, namely the J. Craig Venter Institute and the Laboratory of Viral Metagenomics, Rega Institute, among others.

The unit has undertaken several projects and successfully generated data on bacterial, viral and human genomes. Currently, work is ongoing on bacterial and fungal metagenomics studies through 16S rRNA sequencing.

In addition, the unit is also working on plasmid/insert sequencing and whole genome sequencing of animal and human rotaviruses. The unit has capacity to undertake other kinds of panels like the HLA, Pan-cancer and Tumor 15 sequencing, among others.

Several investigators from the UFS including but not limited to Prof Felicity Burt, Prof Wijnand Swart, Dr Frans O’Neil, Dr Trudi O'Neill, Dr Charlotte Boucher, Dr Marieka Gryzenhout and Dr Kamaldeen Baba are actively in collaboration with the NGS unit.

The unit has also invested in other specialised equipment such as the M220 Focused-ultrasonicator (Covaris), 2100 Bioanalyzer system (Agilent) and the real-time PCR cycler, the Rotor-Gene Q (Qiagen), which both the UFS and external investigators can use for their research.

Investigators working on molecular and related studies are encouraged to engage with Dr Nyaga on how they would like to approach their genomics projects at the UFS NGS unit. 

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