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21 June 2021 | Story Dr Patricks Voua Otomo
Dr Patricks Voua Otomo
Dr Patricks Voua Otomo is the Head of the Ecotoxicology Research Laboratory and Subject Head: Zoology and Entomology in the Faculty of Natural and Agricultural Sciences at the University of the Free State (UFS).

The month of June is earmarked for the celebration of National Environment Month, with the South African government and captains of industry leading the way by stimulating awareness on environmental issues and challenging everyone to become agents for change. World Environment Day, the biggest annual event of the United Nations Environment Programme (UNEP), is commemorated on 5 June, with the aim of galvanising positive environmental action. The University of the Free State (UFS) – through researchers from the Afromontane Research Unit (ARU) housed on the Qwaqwa Campus of the UFS – is playing its part in the fight against pollution, and especially water pollution in the eastern Free State.

The ARU initiated a research project in 2021, focusing on the assessment of the quality of local natural water resources in order to foster sustainable development in Phuthaditjhaba, and because of the recurring challenges pertaining to water quality and quantity in the Maluti-a-Phofung (MAP) Local Municipality. For the first such project focusing exclusively on pollution issues in a select Afromontane region – led by Dr Patricks Voua Otomo, Head of the Ecotoxicology Research Laboratory and Subject Head: Zoology and Entomology in the Faculty of Natural and Agricultural Sciences – a vibrant team of ARU scientists and students set out to determine the ecotoxicological and bacteriological state of water resources in MAP. With the permission of MAP, ARU researchers and students were allowed access to municipal wastewater treatment plants in the towns of Phuthaditjhaba and Harrismith, and ethical clearance from the UFS permitted limited environmental sampling and laboratory testing using live organisms such as snails and earthworms.

Focusing on the quality of natural water bodies
In November 2016, Ms Portia Mosolloane (2016 honours student) presented the preliminary findings of the project at an ARU colloquium held in the Golden Gate Highlands National Park. Her work has drawn attention to potential localised incidents of terrestrial contamination linked to sewage sludge management in the region. Those early findings were published internationally, and in May 2018, Ms Mosolloane went on to present her research at the 28th Annual Meeting of the Society of Environmental Toxicology and Chemistry (SETAC) in Rome, Italy.

In an attempt to mitigate sewage sludge-induced soil pollution, Ms Nomasonto Dlamini (master’s student) conducted research from 2018 on the potential beneficial effects of biochar amendment on the sewage sludge as an alternative management strategy. The results revealed that mixing biochar with sewage sludge prior to open-air storage would significantly decrease the toxic effects on terrestrial organisms such as oligochaetes. This work is still ongoing, although in May 2019, Ms Dlamini presented some of her findings at the Fifth World Congress on Risk Development and Resilience in Cape Town.

From the start, an important focus of our research has been the quality of natural water bodies in our region and its ability to support life. In 2020, Ms Mosolloane graduated cum laude with a Master of Science, having successfully established that, particularly along polluted and degraded sections of our rivers, the diversity of riparian invertebrate was heavily skewed and reduced. Her work on water quality has suggested that our failing wastewater treatment plants (due to ageing, capacity overload, and poor management) are contributing to the release of pathogenic bacteria such as Escherichia coli in the local rivers.

Mr Mbuyiselwa Moloi (a 2020 Master of Science graduate from the project) found through his research that wastewater treatment plants only contribute partially to river pollution in the region. His work, focusing on metal pollution in the Elands River (Phuthaditjhaba) and the Wilge River (Harrismith), established that although there is evidence of metal enrichment after wastewater processing by the treatment plants, some of the metal in the rivers emanates from the communities that, due to the lack of adequate refuse removal services, often dispose of their household waste directly into the rivers. Mr Moloi’s research was presented at the 2019 International Mountain Conference in Innsbruck, Austria, and was subsequently published in the International Journal of Hygiene and Environmental Health in 2020.

Ms Matseleng Semase (a 2020 Master of Science graduate from the project) worked on establishing whether the quality of the effluent released from the local wastewater treatment plants was conducive to supporting aquatic life. Using a snail species in the laboratory, she found that although of substandard quality, the effluent released from the treatment plants did not hamper growth and reproduction in her test organism. This pointed to the fact that corrective measures could still be taken to reduce the harmful impact of wastewater management processes on river health in the eastern Free State. Ms Semase’s work was presented at the 9th SETAC Africa Biennial Conference held in Cape Town in 2019, and her findings were submitted for publication in Environmental Science and Pollution Research.

First such project focusing exclusively on pollution issues
Some of our findings infused new life into the project, steering our work in unexpected directions. Early in the project we came to realise that there was a paucity of research focusing on pollution in mountain areas in South Africa and in Africa at large. Mr Hendrik Stander joined the project in 2019 as a master’s student. His task was to work on the development of fast and reliable behavioural testing protocols that could be used in the project. His preliminary findings were presented at the 40th annual meeting of SETAC North America in Toronto, Canada, and were subsequently published in the Bulletin of Environmental Contamination and Toxicology. Ms Sanele Mnkandla, who joined the project as a PhD candidate in 2020, is working on proposing water remediation strategies that could help improve the state of the rivers in the region. She recently submitted a review article on the topic for publication in Environmental Evidence. Another review article in the making and focusing on literature evidence of mountain pollution in Africa, is the brainchild of Dr Ozekeke Ogbeide, a collaborator from the University of Benin (Nigeria), who co-supervised several students and co-authored some of the scientific publications from the project.

This ongoing research, under the auspices of the ARU, is the first such project focusing exclusively on pollution issues in a select Afromontane region. With Ms Dlamini, Mr Stander, and Ms Mnkandla still actively involved in the project, we look forward to finding more answers to the environmental challenges of the eastern Free State and to working together with MAP towards environmental sustainability in the region.

News Archive

Fight against Ebola virus requires more research
2014-10-22

 

Dr Abdon Atangana
Photo: Ifa Tshishonge
Dr Abdon Atangana, a postdoctoral researcher in the Institute for Groundwater Studies at the University of the Free State (UFS), wrote an article related to the Ebola virus: Modelling the Ebola haemorrhagic fever with the beta-derivative: Deathly infection disease in West African countries.

“The filoviruses belong to a virus family named filoviridae. This virus can cause unembellished haemorrhagic fever in humans and nonhuman monkeys. In literature, only two members of this virus family have been mentioned, namely the Marburg virus and the Ebola virus. However, so far only five species of the Ebola virus have been identified, including:  Ivory Coast, Sudan, Zaire, Reston and Bundibugyo.

“Among these families, the Ebola virus is the only member of the Zaire Ebola virus species and also the most dangerous, being responsible for the largest number of outbreaks.

“Ebola is an unusual, but fatal virus that causes bleeding inside and outside the body. As the virus spreads through the body, it damages the immune system and organs. Ultimately, it causes the blood-clotting levels in cells to drop. This leads to severe, uncontrollable bleeding.

Since all physical problems can be modelled via mathematical equation, Dr Atangana aimed in his research (the paper was published in BioMed Research International with impact factor 2.701) to analyse the spread of this deadly disease using mathematical equations. We shall propose a model underpinning the spread of this disease in a given Sub-Saharan African country,” he said.

The mathematical equations are used to predict the future behaviour of the disease, especially the spread of the disease among the targeted population. These mathematical equations are called differential equation and are only using the concept of rate of change over time.

However, there is several definitions for derivative, and the choice of the derivative used for such a model is very important, because the more accurate the model, the better results will be obtained.  The classical derivative describes the change of rate, but it is an approximation of the real velocity of the object under study. The beta derivative is the modification of the classical derivative that takes into account the time scale and also has a new parameter that can be considered as the fractional order.  

“I have used the beta derivative to model the spread of the fatal disease called Ebola, which has killed many people in the West African countries, including Nigeria, Sierra Leone, Guinea and Liberia, since December 2013,” he said.

The constructed mathematical equations were called Atangana’s Beta Ebola System of Equations (ABESE). “We did the investigation of the stable endemic points and presented the Eigen-Values using the Jacobian method. The homotopy decomposition method was used to solve the resulted system of equations. The convergence of the method was presented and some numerical simulations were done for different values of beta.

“The simulations showed that our model is more realistic for all betas less than 0.5.  The model revealed that, if there were no recovery precaution for a given population in a West African country, the entire population of that country would all die in a very short period of time, even if the total number of the infected population is very small.  In simple terms, the prediction revealed a fast spread of the virus among the targeted population. These results can be used to educate and inform people about the rapid spread of the deadly disease,” he said.

The spread of Ebola among people only occurs through direct contact with the blood or body fluids of a person after symptoms have developed. Body fluid that may contain the Ebola virus includes saliva, mucus, vomit, faeces, sweat, tears, breast milk, urine and semen. Entry points include the nose, mouth, eyes, open wounds, cuts and abrasions. Note should be taken that contact with objects contaminated by the virus, particularly needles and syringes, may also transmit the infection.

“Based on the predictions in this paper, we are calling on more research regarding this disease; in particular, we are calling on researchers to pay attention to finding an efficient cure or more effective prevention, to reduce the risk of contamination,” Dr Atangana said.


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