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CHPC students read more
The top finishing UFS team, Team 5, consisting of Nhlonipho Shezi, Kgoboketso Mphahlele, Albert van Eck (mentor), Itumeleng Khaka, and Bophelo Pharasi came third during the national round of the National Integrated Cyber Infrastructure Systems (NICIS) CHPC’s Student Cluster Competition.

Two students from the University of the Free State (UFS) who took part in the National Integrated Cyber Infrastructure Systems (NICIS) CHPC Student Cluster Competition were selected as part of the National Team to compete at the International Supercomputing Conference (ISC) Student Cluster Competition next year.

Itumeleng Khaka and Nhlonipho Shezi, both currently studying towards a Bachelor of Science degree in Information Technology majoring in Computer Science and Business Management, were part of one of the university’s teams (Team 5) that took third place during the national round of the competition.

Bophelo Pharasi (Bachelor of Science in Information Technology majoring in Computer Science and Business Management) and Kgoboketso Mphahlele (Bachelor of Computer Information Systems) were the other team members, and Albert van Eck, Head of the eResearch and High-Performance Computing Unit, was their mentor. The UFS entered three teams for the competition. 

Another student, Limpho Senatla (Bachelor of Science in Information Technology), was awarded the prize for the female student with the most potential during this competition. Some of the prizes awarded to her include an opportunity to work under the mentorship of sponsors such as Tsolo.io, Diplomics, Intel, and the South African Radio Astronomy Observatory (SARAO).

The other two teams that also participated were Team OptiCompute (mentor: Hendrik van Heerden), consisting of Senatla, Siphesihle Mvelase (Bachelor of Science in Information Technology majoring in Computer Science and Business Management), Ziphezinhle Malinga (Bachelor of Science in Information Technology majoring in Computer Science and Business Management), Ennosse Mkhutyukelwa (Bachelor of Science in Information Technology majoring in Computer Science and Chemistry); and Team KKRT (mentor: Zirke le Roux), consisting of Kananelo Nyakallo Mofokeng (Bachelor of Science in Information Technology majoring in Computer Science and Physics), Boitumelo Ramasike (Bachelor of Science in Information Technology majoring in Computer Science and Business Management), Kamohelo Kolanchu (Bachelor of Science in Information Technology majoring in Computer Science and Mathematics), and Thabang Maokeng (Bachelor of Computer Information Systems).

Highly stressful and demanding

“Since 2017, the UFS has competed in the CHPC Student Cluster Competition, with various successful outcomes. This year was no exception, with Team 5 winning third place at the national round. All teams endured a highly stressful and demanding round where external factors such as load shedding, late and incomplete hardware deliveries, extreme heat, and sleep deprivation played a role,” says Van Eck.

According to its website, the Centre for High-Performance Computing (CHPC), a division of the Council for Scientific and Industrial Research (CSIR), annually hosts a Human Capital Development (HCD) programme for undergraduate students currently enrolled in Science, Technology, Engineering and Mathematics (STEM) fields at South African universities. They undergo training that will take them from zero knowledge of HPC to being able to build mini clusters through various rounds.

The competition is held annually and consists of three rounds: a selection, national, and international round. A team composed of four undergraduate (second-year) students can enter the competition.

This year, twenty teams from eight universities participated in the selection round. Each year, this round is hosted at a different university in the country, with the UFS Bloemfontein Campus playing host this year from 10 to 15 July. During the first round, students were exposed to various technologies and concepts used in HPC and scientific computing. Students were then evaluated according to their technical skills acquired during the selection round, and had to design, present, and defend a cluster design with its network topology.

The national round, for which all three UFS teams qualified, was held at the Kruger National Park from 3 to 8 December.

Travel internationally

According to Van Eck, the students were given a limited budget to procure a small cluster for this round. Students then had to assemble the cluster and start configuring it during this round. After installing and configuring their clusters, students had to install and optimise scientific software. Installing and optimising scientific software is quite challenging. One must consider various technologies such as hardware components, networking, operating systems, compilers, intercommunication between processes, and the functionality of the software.

The winning team in the national round is combined with two members of either the second or third-place winners and two reserves selected from those teams. This team will travel to Austin, Texas, early next year to visit the Texas Advanced Computing Centre (TACC). Students will also undergo more training at Dell Labs in the USA.

The team will compete at the International Supercomputing Conference (ISC) Student Cluster Competition (SCC) against teams from across America, Europe, and Asia. This competition is held in Germany and sees the best international students competing in the final round. The South African teams have won this round on several occasions.

“The competition takes all students out of their comfort zones. The technologies and methodologies they are exposed to are state-of-the-art in theoretical and computational sciences. In the first round, students are trained by industry professionals on concepts they would otherwise never be exposed to. They come into contact with multiple disciplines within IT, engineering, and some scientific fields. The learning curve during this competition is immense, but students who rise to the challenge reap the benefits in the long run. With prizes such as laptops, prize money, and mentorship from the industry, multiple opportunities can be utilised,” says Van Eck.

Exposure to various technologies

Van Eck says even members from teams that do not make it into the top positions can benefit from exposure to various technologies and networking with other delegates. Leveraging knowledge attained during the competition also enhances one's ability to apply knowledge to other parts of one's career.

“To become an HPC specialist, one must master various field-specific domains, and each of these domains can become a career in itself should a student identify a specific field of more interest to them. This type of exposure is usually only experienced once one enters the workforce. It may be difficult and costly to enter a specific domain by that time. Earlier exposure during a competition like this can assist a student in identifying which fields of science, engineering, or IT they would like to focus on and perhaps later specialise in.”

News Archive

UFS researchers receive awards from the NSTF
2008-06-04

The recipients of the two awards are, from the left: Prof. Jan van der Westhuizen, UFS Department of Chemistry, Dr Susan Bonnet, UFS Department of Chemistry, Prof. Thinus van der Merwe, FARMOVS-PAREXEL, Prof. Maryke Labuschagne, UFS Department of Plant Sciences, and Prof. Ken Swart, FARMOVS-PAREXEL.
Photo: Lacea Loader

  

UFS researchers receive awards from the NSTF   

The University of the Free State (UFS) last week received two prestigious awards from the National Science and Technology Forum (NSTF) during its tenth gala-awards ceremony held in Kempton Park.

Prof. Maryke Labuschagne from the Department of Plant Sciences at the UFS was the female recipient of the research capacity-development award over the last ten years. She received the award for her successful mentoring of black researchers and students. The award, sponsored by Eskom, includes a prize of R100 000 which will be used for research purposes.  

A team consisting of Prof. Jan van der Westhuizen and Dr Susan Bonnet from the Department of Chemistry at the UFS and Prof. Kenneth Swart and Prof. Thinus van der Merwe from FARMOVS–PAREXEL received the innovation award for an outstanding contribution to science, engineering and technology from either an individual or a team over the last ten years.
 
Prof. Labuschagne, an expert in the field of plant breeding and food security in Africa, received the award for her contribution to the training and development of black students and researchers in this field. Various black students successfully completed their postgraduate studies under her guidance at the UFS during the past ten years, with positive results.

Research by her South African students has led to a firmly entrenched research relationship between the Agricultural Research Council (ARC) and the UFS, while research by her local and international students has culminated in no less than 82 publications over the last decade.

It has also led to the establishment of collaboration agreements with universities and research institutes in Malawi, Kenya, Uganda and Tanzania – among others with the University of Malawi where Prof. Labuschagne and her students are involved in the International Programme in the Chemical Sciences (IPICS) of the Uppsala University in Sweden. The project focuses on the study of genetics and chemistry of tropical roots and tuber crops in Malawi. This has led to collaboration with international research organisations and has generated overseas funding.

The combined team from FARMOVS–PAREXEL and the UFS won an award for the synthesis of drug analogues used as reference products during the analysis of the drug concentration in blood, from existing and new drugs registered nationally and internationally.

The project resulted in capacity building in synthetic organic chemistry, mass spectrometry and chromatography: Five master’s degrees were completed, seven are in progress, and six postgraduate students commenced with Ph.D.’s.

The skills transferred during this project are already being applied to examine the properties of indigenous medicinal plants as part of the recently established UFS novel drugs and bioactive compound cluster.

Applied Biosystems, the Canadian manufacturer of mass spectrometers, donated equipment to the value of more than R10 million for this project. As a result the UFS is one of the few universities in the world that can offer postgraduate training in bioanalytical chemistry.

Prof. Hendrik Swart, head of the Department of Physics at the UFS, and Dr Martin Ntwaeaborwa, senior lecturer at the Department of Physics were finalist in the research- capacity developer and black-researcher categories respectively.
The NSTF awards gives recognition to the outstanding contributions of individuals and groups to science, engineering and technology. This includes all practising scientists, engineers and technologists across the system of innovation, including, for example, teachers and students in mathematics, science and technology. The NSTF represents government, science councils, professional bodies, higher education, business and civil society.

Altogether nine individuals and three organisations were presented with the NSTF Awards trophy by the Minister of Science and Technology, Mr Mosibudi Mangena.

Media Release
Issued by: Lacea Loader
Assistant Director: Media Liaison
Tel:  051 401 2584
Cell:  083 645 2454
E-mail:  loaderl.stg@ufs.ac.za
4 June 2008

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