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UFS students to compete in the International Super Computing (ISC) Student Cluster Competition

15 January 2024 | Story André Damons | Photo Supplied

CHPC students read more — The top finishing UFS team, Team 5, consisting of Nhlonipho Shezi, Kgoboketso Mphahlele, Albert van Eck (mentor), Itumeleng Khaka, and Bophelo Pharasi came third during the national round of the National Integrated Cyber Infrastructure Systems (NICIS) CHPC’s Student Cluster Competition.

Two students from the University of the Free State (UFS) who took part in the National Integrated Cyber Infrastructure Systems (NICIS) CHPC Student Cluster Competition were selected as part of the National Team to compete at the International Supercomputing Conference (ISC) Student Cluster Competition next year.

Itumeleng Khaka and Nhlonipho Shezi, both currently studying towards a Bachelor of Science degree in Information Technology majoring in Computer Science and Business Management, were part of one of the university’s teams (Team 5) that took third place during the national round of the competition.

Bophelo Pharasi (Bachelor of Science in Information Technology majoring in Computer Science and Business Management) and Kgoboketso Mphahlele (Bachelor of Computer Information Systems) were the other team members, and Albert van Eck, Head of the eResearch and High-Performance Computing Unit, was their mentor. The UFS entered three teams for the competition.

Another student, Limpho Senatla (Bachelor of Science in Information Technology), was awarded the prize for the female student with the most potential during this competition. Some of the prizes awarded to her include an opportunity to work under the mentorship of sponsors such as Tsolo.io, Diplomics, Intel, and the South African Radio Astronomy Observatory (SARAO).

The other two teams that also participated were Team OptiCompute (mentor: Hendrik van Heerden), consisting of Senatla, Siphesihle Mvelase (Bachelor of Science in Information Technology majoring in Computer Science and Business Management), Ziphezinhle Malinga (Bachelor of Science in Information Technology majoring in Computer Science and Business Management), Ennosse Mkhutyukelwa (Bachelor of Science in Information Technology majoring in Computer Science and Chemistry); and Team KKRT (mentor: Zirke le Roux), consisting of Kananelo Nyakallo Mofokeng (Bachelor of Science in Information Technology majoring in Computer Science and Physics), Boitumelo Ramasike (Bachelor of Science in Information Technology majoring in Computer Science and Business Management), Kamohelo Kolanchu (Bachelor of Science in Information Technology majoring in Computer Science and Mathematics), and Thabang Maokeng (Bachelor of Computer Information Systems).

Highly stressful and demanding

“Since 2017, the UFS has competed in the CHPC Student Cluster Competition, with various successful outcomes. This year was no exception, with Team 5 winning third place at the national round. All teams endured a highly stressful and demanding round where external factors such as load shedding, late and incomplete hardware deliveries, extreme heat, and sleep deprivation played a role,” says Van Eck.

According to its website, the Centre for High-Performance Computing (CHPC), a division of the Council for Scientific and Industrial Research (CSIR), annually hosts a Human Capital Development (HCD) programme for undergraduate students currently enrolled in Science, Technology, Engineering and Mathematics (STEM) fields at South African universities. They undergo training that will take them from zero knowledge of HPC to being able to build mini clusters through various rounds.

The competition is held annually and consists of three rounds: a selection, national, and international round. A team composed of four undergraduate (second-year) students can enter the competition.

This year, twenty teams from eight universities participated in the selection round. Each year, this round is hosted at a different university in the country, with the UFS Bloemfontein Campus playing host this year from 10 to 15 July. During the first round, students were exposed to various technologies and concepts used in HPC and scientific computing. Students were then evaluated according to their technical skills acquired during the selection round, and had to design, present, and defend a cluster design with its network topology.

The national round, for which all three UFS teams qualified, was held at the Kruger National Park from 3 to 8 December.

Travel internationally

According to Van Eck, the students were given a limited budget to procure a small cluster for this round. Students then had to assemble the cluster and start configuring it during this round. After installing and configuring their clusters, students had to install and optimise scientific software. Installing and optimising scientific software is quite challenging. One must consider various technologies such as hardware components, networking, operating systems, compilers, intercommunication between processes, and the functionality of the software.

The winning team in the national round is combined with two members of either the second or third-place winners and two reserves selected from those teams. This team will travel to Austin, Texas, early next year to visit the Texas Advanced Computing Centre (TACC). Students will also undergo more training at Dell Labs in the USA.

The team will compete at the International Supercomputing Conference (ISC) Student Cluster Competition (SCC) against teams from across America, Europe, and Asia. This competition is held in Germany and sees the best international students competing in the final round. The South African teams have won this round on several occasions.

“The competition takes all students out of their comfort zones. The technologies and methodologies they are exposed to are state-of-the-art in theoretical and computational sciences. In the first round, students are trained by industry professionals on concepts they would otherwise never be exposed to. They come into contact with multiple disciplines within IT, engineering, and some scientific fields. The learning curve during this competition is immense, but students who rise to the challenge reap the benefits in the long run. With prizes such as laptops, prize money, and mentorship from the industry, multiple opportunities can be utilised,” says Van Eck.

Exposure to various technologies

Van Eck says even members from teams that do not make it into the top positions can benefit from exposure to various technologies and networking with other delegates. Leveraging knowledge attained during the competition also enhances one's ability to apply knowledge to other parts of one's career.

“To become an HPC specialist, one must master various field-specific domains, and each of these domains can become a career in itself should a student identify a specific field of more interest to them. This type of exposure is usually only experienced once one enters the workforce. It may be difficult and costly to enter a specific domain by that time. Earlier exposure during a competition like this can assist a student in identifying which fields of science, engineering, or IT they would like to focus on and perhaps later specialise in.”

News Archive

Carbon dioxide makes for more aromatic decaffeinated coffee

2017-10-27

The Inorganic Group in the Department of Chemistry
at the UFS is systematically researching the utilisation
of carbon dioxide. From the left, are, Dr Ebrahiem Botha,
Postdoctoral Fellow; Mahlomolo Khasemene, MSc student;
Prof André Roodt; Dr Marietjie Schutte-Smith, Senior Lecturer;
and Mokete Motente, MSc student.
Photo: Charl Devenish

Several industries in South Africa are currently producing hundreds of thousands of tons of carbon dioxide a year, which are released directly into the air. A typical family sedan doing around 10 000 km per year, is annually releasing more than one ton of carbon dioxide into the atmosphere.

The Inorganic Chemistry Research Group in the Department of Chemistry at the University of the Free State (UFS), in collaboration with the University of Zurich in Switzerland, has focused in recent years on using carbon dioxide – which is regarded as a harmful and global warming gas – in a meaningful way.

According to Prof André Roodt, Head of Inorganic Chemistry at the UFS, the Department of Chemistry has for the past five decades been researching natural products that could be extracted from plants. These products are manufactured by plants through photosynthesis, in other words the utilisation of sunlight and carbon dioxide, nitrogen, and other nutrients from the soil.

Caffeine and chlorophyll
“The Inorganic group is systematically researching the utilisation of carbon dioxide. Carbon dioxide is absorbed by plants through chlorophyll and used to make interesting and valuable compounds and sugars, which in turn could be used for the production of important new medicines,” says Prof Roodt.

Caffeine, a major energy enhancer, is also manufactured through photosynthesis in plants. It is commonly found in tea and coffee, but also (artificially added) in energy drinks. Because caffeine is a stimulant of the central nervous system and reduces fatigue and drowsiness, some people prefer decaffeinated coffee when enjoying this hot drink late at night.

Removing caffeine from coffee could be expensive and time-consuming, but also environmentally unfriendly, because it involves the use of harmful and flammable liquids. Some of the Inorganic Group’s research focus areas include the use of carbon dioxide for the extraction of compounds, such as caffeine from plants.

“Therefore, the research could lead to the availability of more decaffeinated coffee products. Although decaffeinated coffee is currently aromatic, we want to investigate further to ensure better quality flavours,” says Prof Roodt.

Another research aspect the team is focusing on is the use of carbon dioxide to extract chlorophyll from plants which have medicinal properties themselves. Chemical suppliers sell chlorophyll at R3 000 a gram. “In the process of investigating chlorophyll, our group discovered simpler techniques to comfortably extract larger quantities from green vegetables and other plants,” says Prof Roodt.

Medicines
In addition, the Inorganic Research Group is also looking to use carbon dioxide as a building block for more valuable compounds. Some of these compounds will be used in the Inorganic Group’s research focus on radiopharmaceutical products for the identification and possibly even the treatment of diseases such as certain cancers, tuberculosis, and malaria.

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