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12 March 2024 Photo Supplied
ARU2024 Conference
SAMC2025 (scheduled 17 to 20 March 2025 at Champagne Sports Resort) will build on the highly successful First Southern African Mountain Conference (SAMC2022) held in March 2022.

On 5 March 2024, the first announcement went out for the Second Southern African Mountain Conference (SAMC2025). SAMC2025 will take place next year from 17 to 20 March at Champagne Sports Resort. The theme for the upcoming conference is: Southern African Mountains – Overcoming Boundaries and Barriers. 

This event will once again bring together academics, researchers, early career professionals, practitioners, policy makers, postgraduate students, and government officials to engage and exchange experiences, research findings, problem solving, and to foster partnerships regarding the transboundary and transdisciplinary sustainability of Southern African mountains. 

The SAMC series is conceptualised by the Afromontane Research Unit (ARU) at the University of the Free State (UFS), the African Mountain Research Foundation (AMRF), and Global Mountain Safeguard Research (GLOMOS) – a joint initiative between EURAC Research and the United Nations University Institute for Environment and Human Security) and implemented by the Peaks Foundation.

Prof Ralph Clark, Director of the ARU, says “SAM2022 was a wonderful event that greatly encouraged regional collegiality around Southern African mountains. We hope that SAMC2025 will be even more impactful in growing our regional community of practice for a stronger transboundary agenda, and for attaining real solutions to the problems facing mountain ecosystems and mountain peoples.”

With Southern African mountains comprising those situated south of the Congo Rainforest and Lake Rukwa – including the mountainous islands of the western Indian Ocean – SAMC2025 is encouraging participation from Angola, the Comoros, the Democratic Republic of the Congo, Eswatini, Lesotho, Madagascar, Malawi, Mauritius, Mozambique, Namibia, Réunion, South Africa, southern Tanzania, Zambia, and Zimbabwe. 

According to the organisers, the SAMC series is purposefully multi- and trans-disciplinary, with a strong impetus to link science, policy, and practitioner realms, and thus all approaches are encouraged. A first of its kind in the region will be a Royal Mountain Indaba, bringing together customary law, mountains, and the Sustainable Development Goals, given that vast tracks of mountain-scape in Southern Africa are directly under traditional governance.  

SAMC2025 will build on the highly successful first Southern African Mountain Conference (SAMC2022) held in March 2022. This, the first of its kind in Southern Africa, attracted 259 participants from 21 countries, with 168 papers delivered and four sponsored special sessions. SAMC2025 will include plenary sessions, parallel oral paper presentation sessions, poster sessions, panel discussions, and sessions for special interest groups – with separate review tracks for abstract submissions from the science, policy, and practitioner sectors that accommodate those sectors to their best advantage. 

The following useful resources are available and can be downloaded:

1. Invitation SAMC2025.

2. Announcements and Call for Abstracts – document includes access to

  • call for abstracts with link to online submission system;
  • call for proposals for workshops and/or panel discussions; 
  • publication of selected conference papers; 
  • registration information; 
  • student and early career academics summit; 
  • important dates; 
  • venue details; 
  • information for international travellers; and 
  • information for directing enquiries. 

3. Guidelines for the submission of abstracts – document includes access to

  • presentation categories and types;
  • review of abstracts;
  • style guide for abstracts submitted for oral or poster presentations;
  • conditions; and
  • other considerations with regard to formatting, style, and technical details.
  • review of proposals;
  • style guide for proposals for workshops and/or panel discussions; and
  • conditions. 

News Archive

Newly operational sequencing unit in genomics at UFS
2016-09-09

Description: Next Generation Sequencing  Tags: Next Generation Sequencing

Dr Martin Nyaga and his research assistant,
Tshidiso Mogotsi in the Next Generation
Sequencing Laboratory.
Photo: Charl Devenish

The Next Generation Sequencing (NGS) unit at the UFS was established as an interdisciplinary facility under the Directorate for Research Development, Faculty of Health Sciences and Faculty of Natural and Agricultural Sciences.

The aim of the NGS facility is to aid internal and external investigators undertaking studies on Deoxyribonucleic acid (DNA) sequencing, assembly and bioinformatics approaches using the more advanced Illumina MiSeq NGS platform.

The NGS unit became operational in 2016 and is managed by Dr Martin Nyaga and administered through the office of the Dean, Faculty of Health Sciences, under the leadership of Prof Gert Van Zyl. Dr Nyaga has vast experience in microbial genomics, having done his PhD in Molecular Virology.

He has worked and collaborated with globally recognised centres of excellence in Prokaryotic and Eukaryotic genomics, namely the J. Craig Venter Institute and the Laboratory of Viral Metagenomics, Rega Institute, among others.

The unit has undertaken several projects and successfully generated data on bacterial, viral and human genomes. Currently, work is ongoing on bacterial and fungal metagenomics studies through 16S rRNA sequencing.

In addition, the unit is also working on plasmid/insert sequencing and whole genome sequencing of animal and human rotaviruses. The unit has capacity to undertake other kinds of panels like the HLA, Pan-cancer and Tumor 15 sequencing, among others.

Several investigators from the UFS including but not limited to Prof Felicity Burt, Prof Wijnand Swart, Dr Frans O’Neil, Dr Trudi O'Neill, Dr Charlotte Boucher, Dr Marieka Gryzenhout and Dr Kamaldeen Baba are actively in collaboration with the NGS unit.

The unit has also invested in other specialised equipment such as the M220 Focused-ultrasonicator (Covaris), 2100 Bioanalyzer system (Agilent) and the real-time PCR cycler, the Rotor-Gene Q (Qiagen), which both the UFS and external investigators can use for their research.

Investigators working on molecular and related studies are encouraged to engage with Dr Nyaga on how they would like to approach their genomics projects at the UFS NGS unit. 

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