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Rust diseases remain a serious threat to food crops in South Africa

07 August 2025 | Story Martinette Brits | Photo Stephen Collett

Prof Willem Boshoff shares insights from decades of rust disease research during his inaugural lecture at the University of the Free State.

Rust diseases of food crops remain one of agriculture’s most enduring and evolving challenges. In his inaugural lecture on 23 July 2025 at the University of the Free State (UFS), Prof Willem Boshoff shared how these complex pathogens continue to pose a significant threat to South Africa’s staple crops – and why continued research is more critical than ever.

Titled Battling rust diseases of food crops in South Africa, the lecture reflected on decades of rust research and recent developments in pathogen virulence. Prof Boshoff, from the Department of Plant Sciences, emphasised that the threat posed by rust fungi today stems from their “mechanisms of variability, their ease of long-distance spore dispersal, and subsequent foreign race incursions”.

A shifting disease landscape

Rust fungi are biotrophic organisms that cannot be cultured on artificial growth media. This makes rust research a technically demanding field that requires living pathogen collections, seed sources, skilled researchers, and specialised infrastructure. Prof Boshoff noted that for more than 35 years, the UFS has been at the forefront of this work, monitoring rust pathogens on wheat, barley, oats, maize, and sunflower.

While wheat remains the most extensively studied type, recent rust outbreaks across a range of crops point to a worrying trend. A localised outbreak of stem rust on spring wheat in the Western Cape has been linked to race BFGSF, which carries a previously unknown combination of virulence genes affecting both wheat and triticale. In 2021, leaf rust race CNPSK was detected, showing virulence to the highly effective Lr9 resistance gene.

More recently, stripe rust race 142E30A+ – first reported in Zimbabwe – was found in wheat cultivars from the Free State and northern irrigation areas. “Results revealed increased susceptibility of especially spring irrigation wheat cultivars,” Prof Boshoff explained, particularly due to its virulence to the Yr9 and Yr27 resistance genes.

Rust pathogens affecting other crops are also evolving. In maize, only a few lines with mostly stacked resistance gene combinations were effective against all tested isolates. In sunflower, just four of 30 Agricultural Research Council national trial hybrids showed resistance to local rust races.

Building better resistance

A key strategy in rust control lies in identifying and understanding resistance in host plants. This, Prof Boshoff stressed, requires optimised phenotyping systems for both greenhouse and field conditions, along with a solid understanding of available resistance sources. At the UFS, several recent studies have contributed valuable data to both local and international plant breeding programmes.

“Continued local and regional rust research is critical,” he said. “It supports early detection of new races, alerts to producers through updated cultivar responses, and enables efficient breeding strategies and other sustainable methods of rust management.”

The rust programme at the UFS has not only supported varietal release and on-farm risk management, but also strengthened collaboration between plant scientists, industry partners, and international researchers. With South Africa’s strategic location and history of rust surveillance, the programme continues to play a pivotal role in continental and global food security efforts.

About Prof Willem Boshoff

Prof Willem Boshoff is a plant pathologist with a strong background in wheat breeding and rust disease control. He holds four degrees from the University of the Free State, all awarded cum laude: a BScAgric (1994), BScAgric Honours (1995), MScAgric (1997), and PhDAgric (2001). His doctoral research focused on the control of foliar rusts in wheat.

Between 2001 and 2016, he worked as a wheat breeder and contributed to the release of several commercial cultivars. He joined the UFS Department of Plant Sciences in 2017 and has since been actively involved in national and international research projects, capacity development, and advancing disease resistance in food crops.

News Archive

UFS researchers receive awards from the NSTF

2008-06-04

The recipients of the two awards are, from the left: Prof. Jan van der Westhuizen, UFS Department of Chemistry, Dr Susan Bonnet, UFS Department of Chemistry, Prof. Thinus van der Merwe, FARMOVS-PAREXEL, Prof. Maryke Labuschagne, UFS Department of Plant Sciences, and Prof. Ken Swart, FARMOVS-PAREXEL.
Photo: Lacea Loader

UFS researchers receive awards from the NSTF

The University of the Free State (UFS) last week received two prestigious awards from the National Science and Technology Forum (NSTF) during its tenth gala-awards ceremony held in Kempton Park.

Prof. Maryke Labuschagne from the Department of Plant Sciences at the UFS was the female recipient of the research capacity-development award over the last ten years. She received the award for her successful mentoring of black researchers and students. The award, sponsored by Eskom, includes a prize of R100 000 which will be used for research purposes.

A team consisting of Prof. Jan van der Westhuizen and Dr Susan Bonnet from the Department of Chemistry at the UFS and Prof. Kenneth Swart and Prof. Thinus van der Merwe from FARMOVS–PAREXEL received the innovation award for an outstanding contribution to science, engineering and technology from either an individual or a team over the last ten years.

Prof. Labuschagne, an expert in the field of plant breeding and food security in Africa, received the award for her contribution to the training and development of black students and researchers in this field. Various black students successfully completed their postgraduate studies under her guidance at the UFS during the past ten years, with positive results.

Research by her South African students has led to a firmly entrenched research relationship between the Agricultural Research Council (ARC) and the UFS, while research by her local and international students has culminated in no less than 82 publications over the last decade.

It has also led to the establishment of collaboration agreements with universities and research institutes in Malawi, Kenya, Uganda and Tanzania – among others with the University of Malawi where Prof. Labuschagne and her students are involved in the International Programme in the Chemical Sciences (IPICS) of the Uppsala University in Sweden. The project focuses on the study of genetics and chemistry of tropical roots and tuber crops in Malawi. This has led to collaboration with international research organisations and has generated overseas funding.

The combined team from FARMOVS–PAREXEL and the UFS won an award for the synthesis of drug analogues used as reference products during the analysis of the drug concentration in blood, from existing and new drugs registered nationally and internationally.

The project resulted in capacity building in synthetic organic chemistry, mass spectrometry and chromatography: Five master’s degrees were completed, seven are in progress, and six postgraduate students commenced with Ph.D.’s.

The skills transferred during this project are already being applied to examine the properties of indigenous medicinal plants as part of the recently established UFS novel drugs and bioactive compound cluster.

Applied Biosystems, the Canadian manufacturer of mass spectrometers, donated equipment to the value of more than R10 million for this project. As a result the UFS is one of the few universities in the world that can offer postgraduate training in bioanalytical chemistry.

Prof. Hendrik Swart, head of the Department of Physics at the UFS, and Dr Martin Ntwaeaborwa, senior lecturer at the Department of Physics were finalist in the research- capacity developer and black-researcher categories respectively.
The NSTF awards gives recognition to the outstanding contributions of individuals and groups to science, engineering and technology. This includes all practising scientists, engineers and technologists across the system of innovation, including, for example, teachers and students in mathematics, science and technology. The NSTF represents government, science councils, professional bodies, higher education, business and civil society.

Altogether nine individuals and three organisations were presented with the NSTF Awards trophy by the Minister of Science and Technology, Mr Mosibudi Mangena.

Media Release
Issued by: Lacea Loader
Assistant Director: Media Liaison
Tel: 051 401 2584
Cell: 083 645 2454
E-mail: loaderl.stg@ufs.ac.za
4 June 2008

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