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27 June 2025 | Story University of the Free State | Photo Supplied
Ecological Engineering
Dr Jacques Maritz, Albert van Eck, and Dr Nola Redelinghuys are among the University of the Free State researchers driving an interdisciplinary project that combines social insight, high-performance computing, and ecological engineering to support South Africa’s just energy transition.

The University of the Free State (UFS) is taking bold steps to address the complexities of South Africa’s energy transition by combining expertise across disciplines, innovative technologies such as high-performance computing (HPC), and active student involvement. This forward-thinking approach is positioning the UFS at the forefront of solving real-world challenges linked to renewable energy adoption and social dynamics, while equipping students with future-ready skills.

 

Interdisciplinary solutions for a just energy transition

“Current grand challenges – the pressing societal and scientific problems shaping research at the UFS and globally – require students and researchers to include computational approaches such as modelling, simulations, and large-scale data analysis,” says Dr Jacques Maritz, Head of the Unit for Engineering Sciences at the UFS.

“One such example is in merging social dynamics with energy paradigms – two seemingly different worlds, yet connected via scientific elegance,” says Dr Maritz. Energy decisions, such as shifting to renewables, are shaped by the behaviour of communities, governments, and industries. As a recent response to these challenges, ecological and nature-based engineering sciences at the UFS aim to integrate human activity into nature, while benefiting both via the merging of computation, ecological engineering sciences, nature-based solutions, and data-driven complexity science. 

The UFS’ pioneering project models these complex social-energy relationships to better understand how South Africa can sustainably and justly transition from fossil fuels to renewable energy. This interdisciplinary effort involves researchers and students from physics, sociology, engineering, data science, and mathematical modelling working together to map these interdependencies shaped by economic, political, cultural, and community forces.

For students such as Lurgasho Minnie, a final-year MSc Astrophysics student, this interdisciplinary exposure is transformative. “It has given me a new lens or perspective on approaching and solving problems in my field of research. By approaching challenges from an interdisciplinary point of view, new methods and techniques can be applied to solve challenging problems,” he says.

A crucial part of this research involves modelling dynamic social-energy networks using systems thinking, network analysis, and scenario planning. These tools help simulate interactions between government policies, community behaviour, environmental impacts, and technological innovations, allowing researchers to predict and plan for different future scenarios.

Students are actively shaping this work. The first set of social data was collected by UFS students on the Qwaqwa Campus, with training and support from the Centre for Global Change and Student Affairs. These data-gathering efforts are not only enriching the research but also building students' skills in real-world data collection and analysis.

“One of the study objectives is to inform the development of an awareness campaign about the complexities inherent in transitioning from a predominantly non-renewable to a renewable energy system, firstly aimed at UFS students but ultimately at the broader community,” explains Dr Nola Redelinghuys, Senior Lecturer in Sociology at the UFS.

The research team also hopes to help shape sustainable energy solutions for the university itself, with plans to create a renewable energy supply network that balances energy demand and renewable supply across the UFS campuses.

 

High-performance computing powering new insights 

At the heart of this initiative is the UFS High-Performance Computing (HPC) Unit, which enables researchers to run complex simulations and process vast data sets. The HPC is essential for solving problems that require immense computing power and data storage, and the UFS is making these resources accessible to a growing number of students – even those from non-computational disciplines.

“The eResearch and HPC team promotes the development of new skills and knowledge to harness the power of HPC and expand one’s technological abilities to solve problems. The HPC staff must first train a student or researcher to use the system effectively before using their toolsets. Thereafter, students can streamline or even automate specific processes by using a collection of more generic toolsets. Even if not using an HPC daily (or after entering the workforce), the HPC methodologies and toolsets they are exposed to often change how a person approaches future problem sets. Students using the HPC are more likely to share their experiences and are encouraged to assist other students in their department to lessen the burden of entry for newcomers. This broadens the collective knowledge within a department on their toolsets and how to use them effectively,” says Albert van Eck, Director of the UFS HPC.

Students can also learn how to build and configure basic HPC clusters through freely available training materials, opening doors to careers in private cloud hosting, data science, genomics, and other tech industries. By focusing on open-source tools, the UFS ensures that students acquire industry-relevant skills without being locked into specific software vendors.

The project is also laying the groundwork for partnerships with renewable energy companies, technology firms, NGOs, and development agencies. These collaborations will strengthen the UFS’ industry ties and create more work-integrated learning (WIL) opportunities for students.

As part of UFS Vision 130, this project advances academic excellence, societal impact, and inclusivity. By involving diverse staff and students from both the Bloemfontein and Qwaqwa Campuses, it demonstrates the university’s commitment to building a future-ready, skilled, and socially conscious graduate community prepared to tackle South Africa’s energy challenges.

In a country grappling with energy security and the need for a just transition, the UFS’ approach – blending social insight, cutting-edge technology, and student empowerment – offers a valuable model for addressing one of the nation’s most pressing development priorities.

News Archive

Research eradicates bacteria from avocado facility
2017-01-17

 Description: Listeria monocytogenes Tags: Listeria monocytogenes

Listeria monocytogenes as seen under an electron
microscope. The photo was taken with a transmission
electron microscope at the microscopy unit of the UFS.
Bacteriophages (lollipop-like structures) can be seen
next to the bacterial cells.
Photo: Supplied

“The aim of my project was to identify and characterise the contamination problem in an avocado-processing facility and then to find a solution,” said Dr Amy Strydom, postdoctoral fellow in the Department of Microbial Biochemical and Food Biotechnology at the University of the Free State (UFS).

Her PhD, “Control of Listeria monocytogenes in an Avocado-processing Facility”, aimed to identify and characterise the contamination problem in a facility where avocados were processed into guacamole. Dr Strydom completed her MSc in food science in 2009 at Stellenbosch University and this was the catalyst for her starting her PhD in microbiology in 2012 at the UFS. The research was conducted over a period of four years and she graduated in 2016. The research project was funded by the National Research Foundation.

The opportunity to work closely with the food industry further motivated Dr Strydom to conduct her research. The research has made a significant contribution to a food producer (avocado facility) that will sell products that are not contaminated with any pathogens. The public will then buy food that is safe for human consumption.


What is Listeria monocytogenes?

Listeria monocytogenes is a food-borne pathogenic bacterium. When a food product is contaminated with L. monocytogenes, it will not be altered in ways that are obvious to the consumer, such as taste and smell. When ingested, however, it can cause a wide range of illnesses in people with impaired immune systems. “Risk groups include newborn babies, the elderly, and people suffering from diseases that weaken their immune systems,” Dr Strydom said. The processing adjustments based on her findings resulted in decreased numbers of Listeria in the facility.

The bacteria can also survive and grow at refrigeration temperatures, making them dangerous food pathogens, organisms which can cause illnesses [in humans]. Dr Strydom worked closely with the facility and developed an in-house monitoring system by means of which the facility could test their products and the processing environment. She also evaluated bacteriophages as a biological control agent in the processing facility. Bacteriophages are viruses that can only infect specific strains of bacteria. Despite bacteriophage products specifically intended for the use of controlling L. monocytogenes being commercially available in the food industry, Dr Strydom found that only 26% of the L. monocytogenes population in the facility was destroyed by the ListexP100TM product. “I concluded that the genetic diversity of the bacteria in the facility was too high and that the bacteriophages could not be used as a control measure. However, there is much we do not understand about bacteriophages, and with a few adjustments, we might be able to use them in the food industry.”

Microbiological and molecular characterisation of L. monocytogenes

The bacteria were isolated and purified using basic microbiological culturing. Characterisation was done based on specific genes present in the bacterial genome. “I amplified these genes with polymerase chain reaction (PCR), using various primers targeting these specific genes,” Dr Strydom said. Some amplification results were analysed with a subsequent restriction digestion where the genes were cut in specific areas with enzymes to create fragments. The lengths of these fragments can be used to differentiate between strains. “I also compared the whole genomes of some of the bacterial strains.” The bacteriophages were then isolated from waste water samples at the facility using the isolated bacterial strains. “However, I was not able to isolate a bacteriophage that could infect the bacteria in the facility.

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